SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2081496Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2083644Family c.1.8.13: Glycosyl hydrolase family 31 catalytic domain [117372] (5 protein domains)
    Pfam PF01055
  6. 2083693Protein automated matches [310869] (2 species)
    not a true protein

Species:

  1. 2083694Human (Homo sapiens) [TaxId:9606] [311308] (7 PDB entries)
    1. Domain for 3l4t:
    2. Domain for 3l4u:
    3. Domain for 3l4v:
    4. Domain for 3l4w:
    5. Domain for 3l4x:
    6. Domain for 3l4y:
    7. Domain for 3l4z:
  2. 2282707Thermotoga maritima [TaxId:2336] [326008] (4 PDB entries)
    1. Domain for 5m0x:
    2. Domain for 5m12:
    3. Domain for 5m16:
    4. Domain for 5m1i:

More info for Protein automated matches from c.1.8.13: Glycosyl hydrolase family 31 catalytic domain

Timeline for Protein automated matches from c.1.8.13: Glycosyl hydrolase family 31 catalytic domain:

  • Protein automated matches from c.1.8.13: Glycosyl hydrolase family 31 catalytic domain is new in SCOPe 2.06-stable