SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.24: Hyaluronate lyase-like, C-terminal domain [49862] (2 superfamilies)
sandwich, 10 strands in 2 sheets; "folded meander"

Superfamily b.24.2: Glycosyl hydrolase family 98 C-terminal domain-like [310597] (2 families)

(S)

C-terminal half of Pfam PF08307
Slightly different topology from Hyaluronate lyase; contains helical insert

Family b.24.2.0: automated matches [310667] (1 protein)
not a true family
Protein automated matches [310861] (2 species)
not a true protein

Species:

Streptococcus pneumoniae [TaxId:170187] [311251] (2 PDB entries)
1. Domain for 2wmg:
  - Domain d2wmga2: 2wmg A:426-589 [304588]
    Other proteins in same PDB: d2wmga1
    automated match to d2wmfa2
2. Domain for 2wmh:
  - Domain d2wmha2: 2wmh A:426-589 [304590]
    Other proteins in same PDB: d2wmha1
    automated match to d2wmfa2
Streptococcus pneumoniae [TaxId:406556] [311249] (13 PDB entries)
1. Domains for 2wmi:
  1. Domain d2wmia2: 2wmi A:841-1005 [304592]
    Other proteins in same PDB: d2wmia1, d2wmib1
    automated match to d2wmfa2
  2. Domain d2wmib2: 2wmi B:841-1005 [304594]
    Other proteins in same PDB: d2wmia1, d2wmib1
    automated match to d2wmfa2
2. Domains for 2wmj:
  1. Domain d2wmja2: 2wmj A:841-1005 [304596]
    Other proteins in same PDB: d2wmja1, d2wmjb1
    automated match to d2wmfa2
  2. Domain d2wmjb2: 2wmj B:841-1005 [304598]
    Other proteins in same PDB: d2wmja1, d2wmjb1
    automated match to d2wmfa2
3. Domains for 2wmk:
  1. Domain d2wmka2: 2wmk A:841-1005 [304600]
    Other proteins in same PDB: d2wmka1, d2wmkb1
    automated match to d2wmfa2
  2. Domain d2wmkb2: 2wmk B:841-1005 [304602]
    Other proteins in same PDB: d2wmka1, d2wmkb1
    automated match to d2wmfa2
4. Domain for 4d6c:
  - Domain d4d6ca2: 4d6c A:839-1003 [307210]
    Other proteins in same PDB: d4d6ca1, d4d6ca3
    automated match to d2wmfa2
    complexed with edo; mutant
5. Domain for 4d6d:
  - Domain d4d6da2: 4d6d A:839-1003 [307213]
    Other proteins in same PDB: d4d6da1, d4d6da3
    automated match to d2wmfa2
    complexed with edo; mutant
6. Domain for 4d6e:
  - Domain d4d6ea2: 4d6e A:839-1003 [307216]
    Other proteins in same PDB: d4d6ea1, d4d6ea3
    automated match to d2wmfa2
    complexed with edo, so4; mutant
7. Domain for 4d6f:
  - Domain d4d6fa2: 4d6f A:839-1003 [307219]
    Other proteins in same PDB: d4d6fa1, d4d6fa3
    automated match to d2wmfa2
    complexed with edo; mutant
8. Domain for 4d6g:
  - Domain d4d6ga2: 4d6g A:839-1003 [307222]
    Other proteins in same PDB: d4d6ga1, d4d6ga3
    automated match to d2wmfa2
    complexed with edo; mutant
9. Domain for 4d6h:
  - Domain d4d6ha2: 4d6h A:839-1003 [307225]
    Other proteins in same PDB: d4d6ha1, d4d6ha3
    automated match to d2wmfa2
    complexed with edo, so4; mutant
10. Domain for 4d6i:
  - Domain d4d6ia2: 4d6i A:839-1003 [307228]
    Other proteins in same PDB: d4d6ia1, d4d6ia3
    automated match to d2wmfa2
    complexed with edo; mutant
11. Domain for 4d6j:
  - Domain d4d6ja2: 4d6j A:839-1003 [307231]
    Other proteins in same PDB: d4d6ja1, d4d6ja3
    automated match to d2wmfa2
    complexed with edo; mutant
12. Domain for 4d71:
  - Domain d4d71a2: 4d71 A:839-1003 [307234]
    Other proteins in same PDB: d4d71a1, d4d71a3
    automated match to d2wmfa2
    complexed with edo, so4; mutant
13. Domain for 4d72:
  - Domain d4d72a2: 4d72 A:839-1003 [307237]
    Other proteins in same PDB: d4d72a1, d4d72a3
    automated match to d2wmfa2
    complexed with a2g, edo; mutant

More info for Protein automated matches from b.24.2.0: automated matches

Timeline for Protein automated matches from b.24.2.0: automated matches:

Protein automated matches from b.24.2.0: automated matches first appeared in SCOPe 2.06
Protein automated matches from b.24.2.0: automated matches appears in SCOPe 2.07