Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies) core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest |
Superfamily c.97.1: Cytidine deaminase-like [53927] (7 families) contains extra C-terminal strand 5, order 21345 |
Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains [310632] (5 proteins) strand 5 is parallel to strand 4 Pfam PF08210; Pfam PF05240 |
Protein automated matches [310855] (3 species) not a true protein |
Human (Homo sapiens) [TaxId:9606] [311219] (18 PDB entries) |
Domain d2kboa1: 2kbo A:3-194 [304154] Other proteins in same PDB: d2kboa2 automated match to d4xxoa_ complexed with zn |
Domain d2nbqa1: 2nbq A:187-382 [318025] Other proteins in same PDB: d2nbqa2 automated match to d2kema_ complexed with zn |
Domain d3iqsa_: 3iqs A: [305583] automated match to d4xxoa_ complexed with zn |
Domain d3ir2a_: 3ir2 A: [305584] automated match to d4xxoa_ complexed with cl, mg, zn |
Domain d3ir2b_: 3ir2 B: [305585] automated match to d4xxoa_ complexed with cl, mg, zn |
Domain d3v4ja_: 3v4j A: [306675] automated match to d4xxoa_ complexed with pqr, zn |
Domain d3v4jb_: 3v4j B: [306676] automated match to d4xxoa_ complexed with pqr, zn |
Domain d3v4ka_: 3v4k A: [306677] automated match to d4xxoa_ complexed with cl, mg, zn |
Domain d3v4kb_: 3v4k B: [306678] automated match to d4xxoa_ complexed with cl, mg, zn |
Domain d3vm8a_: 3vm8 A: [306681] automated match to d4ioua_ complexed with zn |
Domain d3vm8b_: 3vm8 B: [306682] automated match to d4ioua_ complexed with zn |
Domain d3vowa_: 3vow A: [306685] automated match to d4ioua_ complexed with cl, zn |
Domain d3vowb_: 3vow B: [306686] automated match to d4ioua_ complexed with cl, zn |
Domain d3wusa_: 3wus A: [341944] automated match to d2kema_ complexed with zn |
Domain d3wusb_: 3wus B: [341941] automated match to d2kema_ complexed with zn |
Domain d4rova_: 4rov A: [309484] automated match to d2nytb_ complexed with zn |
Domain d4rovb_: 4rov B: [309485] automated match to d2nytb_ complexed with zn |
Domain d4rowa1: 4row A:193-380 [309486] Other proteins in same PDB: d4rowa2 automated match to d2nytb_ complexed with zn |
Domain d5cqda_: 5cqd A: [310347] Other proteins in same PDB: d5cqdc2 automated match to d4xxoa_ complexed with gol, zn |
Domain d5cqdc1: 5cqd C:188-378 [310348] Other proteins in same PDB: d5cqdc2 automated match to d4xxoa_ complexed with gol, zn |
Domain d5cqha1: 5cqh A:189-378 [310350] Other proteins in same PDB: d5cqha2 automated match to d4xxoa_ complexed with cl, dc, edo, zn |
Domain d5cqia1: 5cqi A:190-378 [310352] Other proteins in same PDB: d5cqia2 automated match to d4xxoa_ complexed with gol, zn |
Domain d5cqka_: 5cqk A: [310354] automated match to d4xxoa_ complexed with gol, na, pge, zn |
Domain d5hx4a_: 5hx4 A: [317509] automated match to d2kema_ |
Domain d5hx4b_: 5hx4 B: [317512] automated match to d2kema_ |
Domain d5hx5a_: 5hx5 A: [317506] automated match to d2kema_ complexed with zn |
Domain d5hx5b_: 5hx5 B: [317606] automated match to d2kema_ complexed with zn |
Domain d5tkma_: 5tkm A: [335430] automated match to d3vm8a_ complexed with zn |
Domain d5tkmb_: 5tkm B: [335566] automated match to d3vm8a_ complexed with zn |
Macaca mulatta [TaxId:9544] [321104] (2 PDB entries) |
Domain d5k81a_: 5k81 A: [321112] automated match to d3vm8a_ complexed with zn |
Domain d5k81b_: 5k81 B: [321162] automated match to d3vm8a_ complexed with zn |
Domain d5k81c_: 5k81 C: [321117] automated match to d3vm8a_ complexed with zn |
Domain d5k81d_: 5k81 D: [321193] automated match to d3vm8a_ complexed with zn |
Domain d5k81e_: 5k81 E: [321209] automated match to d3vm8a_ complexed with zn |
Domain d5k81f_: 5k81 F: [321105] automated match to d3vm8a_ complexed with zn |
Domain d5k82a_: 5k82 A: [321111] automated match to d3vm8a_ complexed with zn |
Domain d5k82b_: 5k82 B: [321107] automated match to d3vm8a_ complexed with zn |
Domain d5k82c_: 5k82 C: [321115] automated match to d3vm8a_ complexed with zn |
Domain d5k82d_: 5k82 D: [321137] automated match to d3vm8a_ complexed with zn |
Mouse (Mus musculus) [TaxId:10090] [311244] (1 PDB entry) |
Domain d2rpza1: 2rpz A:46-224 [304470] Other proteins in same PDB: d2rpza2, d2rpza3 automated match to d2nytb_ complexed with zn |
Timeline for Protein automated matches from c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains: