SCOPe 2.08: Family f.4.7.2: OccK-like (OprK-like)

Lineage for Family f.4.7.2: OccK-like (OprK-like)

1. Root: SCOPe 2.08

2. Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)

3. Fold f.4: Transmembrane beta-barrels [56924] (7 superfamilies)
   not a true fold, gathers together transmembrane barrels of different (n,S)
   annotated by the SCOP(e) curators as 'not a true fold'

4. Superfamily f.4.7: Outer membrane carboxylate (Occ) channels [310584] (3 families)
   Pfam PF03573; Phylogeny discussed in PubMed 22272184
   labile trimers according to PubMed 17952093; each subunit forms (18,22) barrel

5. Family f.4.7.2: OccK-like (OprK-like) [310628] (8 proteins)

Proteins:

1. BenF porin [310733] (1 species)

   • Species Pseudomonas fluorescens Pf-5 [TaxId:220664] [310984] (1 PDB entry)

2. OpdF porin (OccK2) [310734] (1 species)

   • Species Pseudomonas aeruginosa [TaxId:287] [310985] (2 PDB entries)

3. OpdH porin (OccK5) [310737] (1 species)

   • Species Pseudomonas aeruginosa [TaxId:287] [310988] (1 PDB entry)

4. OpdK porin (OccK1) [310732] (2 species)

   1. Species Pseudomonas aeruginosa [TaxId:287] [310983] (1 PDB entry)

   2. Species Pseudomonas aeruginosa, PA01 [TaxId:208964] [310982] (2 PDB entries)

5. OpdL porin (OccK4) [310736] (1 species)

   • Species Pseudomonas aeruginosa [TaxId:287] [310987] (1 PDB entry)

6. OpdO porin (OccK3) [310735] (1 species)

   • Species Pseudomonas aeruginosa [TaxId:287] [310986] (1 PDB entry)

7. OpdQ porin (OccK6) [310738] (1 species)

   • Species Pseudomonas aeruginosa [TaxId:287] [310989] (1 PDB entry)

8. automated matches [310864] (1 species)
   not a true protein

   • Species Pseudomonas aeruginosa [TaxId:208964] [311261] (2 PDB entries)

More info for Family f.4.7.2: OccK-like (OprK-like)

Timeline for Family f.4.7.2: OccK-like (OprK-like):

• Family f.4.7.2: OccK-like (OprK-like) first appeared in SCOPe 2.06
  
• Family f.4.7.2: OccK-like (OprK-like) appears in SCOPe 2.07