Lineage for d4wa1a1 (4wa1 A:8-324)

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2047495Fold b.19: Viral protein domain [49817] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll; form trimers
  4. 2047496Superfamily b.19.1: Viral protein domain [49818] (4 families) (S)
    forms homotrimers
  5. 2047543Family b.19.1.2: Influenza hemagglutinin headpiece [49823] (2 proteins)
  6. 2047544Protein Hemagglutinin [49824] (9 species)
    includes rudiment esterase domain
  7. 2047567Species Influenza a virus (a/harbor seal/massachusetts/1/2011(h3n8)) [TaxId:1136533] [311449] (2 PDB entries)
  8. 2047568Domain d4wa1a1: 4wa1 A:8-324 [309792]
    Other proteins in same PDB: d4wa1a2, d4wa1b2, d4wa1c2, d4wa1d2, d4wa1e2, d4wa1f2
    automated match to d1ha0a1
    complexed with nag

Details for d4wa1a1

PDB Entry: 4wa1 (more details), 1.9 Å

PDB Description: the crystal structure of hemagglutinin from a h3n8 influenza virus isolated from new england harbor seals
PDB Compounds: (A:) Hemagglutinin

SCOPe Domain Sequences for d4wa1a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4wa1a1 b.19.1.2 (A:8-324) Hemagglutinin {Influenza a virus (a/harbor seal/massachusetts/1/2011(h3n8)) [TaxId: 1136533]}
nntatlclghhavpngtivktitddqievtnatelvqssstgkicnnphrildgrdcklm
dallgdphcdvfqdetwdlyverssassncypydvpdyaslrslvassgtlefitegftw
tgvtqngesgackrgpangffsrlnwltksgsvypllnvtmpnndnfdklyvwgvhhpst
nqeqtnlyvqasgrvtvstrrsqqtiipnigsrplvrgqsgrisiywtivkpgdilmins
ngnlvaprgyfkmrtgkssimrsnapidtcisecitpngsipndkpfqnvnkitygacpk
yvkqstlklatgmrnvp

SCOPe Domain Coordinates for d4wa1a1:

Click to download the PDB-style file with coordinates for d4wa1a1.
(The format of our PDB-style files is described here.)

Timeline for d4wa1a1: