SCOPe 2.08: Domain d4krfa3: 4krf A:576-857

Lineage for d4krfa3 (4krf A:576-857)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest

4. Superfamily c.55.3: Ribonuclease H-like [53098] (18 families)
   consists of one domain of this fold

5. Family c.55.3.0: automated matches [191357] (1 protein)
   not a true family

6. Protein automated matches [190396] (40 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [225370] (7 PDB entries)

8. Domain d4krfa3: 4krf A:576-857 [307652]
   Other proteins in same PDB: d4krfa1, d4krfa2
   automated match to d4olaa3
   protein/RNA complex

Details for d4krfa3

PDB Entry: 4krf, 2.1 Å

PDB Description: Structure of Human Argonaute-1 let-7 complex

PDB Compounds: (A:) Protein argonaute-1

SCOPe Domain Sequences for d4krfa3:

Sequence, based on SEQRES records:

>d4krfa3 c.55.3.0 (A:576-857) automated matches {Human (Homo sapiens) [TaxId: 9606]}
lvphqrsavfqqpviflgadvthppagdgkkpsitavvgsmdahpsrycatvrvqrprqe
iiedlsymvrelliqfykstrfkptriifyrdgvpegqlpqilhyellairdaciklekd
yqpgityivvqkrhhtrlfcadknerigksgnipagttvdtnithpfefdfylcshagiq
gtsrpshyyvlwddnrftadelqiltyqlchtyvrctrsvsipapayyarlvafraryhl
vdkehdsgegshisgqsngrdpqalakavqvhqdtlrtmyfa

Sequence, based on observed residues (ATOM records):

>d4krfa3 c.55.3.0 (A:576-857) automated matches {Human (Homo sapiens) [TaxId: 9606]}
lvphqrsavfqqpviflgadvthppakkpsitavvgsmdahpsrycatvrvqrprqeiie
dlsymvrelliqfykstrfkptriifyrdgvpegqlpqilhyellairdaciklekdyqp
gityivvqkrhhtrlfcadknerigksgnipagttvdtnithpfefdfylcshagiqgts
rpshyyvlwddnrftadelqiltyqlchtyvrctrsvsipapayyarlvafraryhlvdk
rdpqalakavqvhqdtlrtmyfa

Timeline for d4krfa3:

• d4krfa3 first appeared in SCOPe 2.06
  
• d4krfa3 appears in SCOPe 2.07