SCOPe 2.06: Domain d3r3lb1: 3r3l B:8-338

Lineage for d3r3lb1 (3r3l B:8-338)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.300: Arenavirus nucleocapsid protein-like [310566] (1 superfamily)

4. Superfamily a.300.1: Arenavirus nucleocapsid protein N-terminal domain-like [310594] (1 family)
   N-terminal half of Pfam PF00843

5. Family a.300.1.1: Arenavirus nucleocapsid protein N-terminal domain [310641] (2 proteins)

6. Protein automated matches [310875] (1 species)
   not a true protein

7. Species Lassa virus [TaxId:11620] [311333] (1 PDB entry)

8. Domain d3r3lb1: 3r3l B:8-338 [306410]
   Other proteins in same PDB: d3r3la2, d3r3lb2, d3r3lc2
   automated match to d3mwpa2
   complexed with mn, zn

Details for d3r3lb1

PDB Entry: 3r3l, 2.45 Å

PDB Description: structure of np protein from lassa av strain

PDB Compounds: (B:) nucleoprotein

SCOPe Domain Sequences for d3r3lb1:

Sequence, based on SEQRES records:

>d3r3lb1 a.300.1.1 (B:8-338) automated matches {Lassa virus [TaxId: 11620]}
ksflwtqslrrelsgycsniklqvvkdaqallhgldfsevsnvqrlmrkqrrddsdlkrl
rdlnqavnnlvelkstqqksvlrvgtlssddlltlaadleklkskvtrterplssgvymg
nlssqqldqrrallnligmtngsqgsqagrdgvvrvwdvknaellnnqfgtmpsltlacl
tkqgqvdlndvvqaltdlgliytakypntsdldrltqshpilnmidtkksslnisgynfs
lgaavkagacmldggnmletikvspqsmdgilksilkvkralgmfvsdtpgernpyenil
ykiclsgdgwpyiasrtsivgrawentvvdl

Sequence, based on observed residues (ATOM records):

>d3r3lb1 a.300.1.1 (B:8-338) automated matches {Lassa virus [TaxId: 11620]}
ksflwtqslrrelsgycsniklqvvkdaqallhgldfsevsnvqrlmrkqrrddsdlkrl
rdlnqavnnlvelkstqqksvlrvgtlssddlltlaadleklkskvtrterplssgvymg
nlssqqldqrrallnligmdgvvrvwdvknaellnnqfgtmpsltlacltkqgqvdlndv
vqaltdlgliytakypntsdldrltqshpilnmidtkksslnisgynfslgaavkagacm
ldggnmletikvspqsmdgilksilkvkralgmfvsdtpgernpyenilykiclsgdgwp
yiasrtsivgrawentvvdl

Timeline for d3r3lb1:

• d3r3lb1 is new in SCOPe 2.06-stable
  
• d3r3lb1 appears in SCOPe 2.07
  
• d3r3lb1 appears in the current release, SCOPe 2.08