SCOPe 2.08: Domain d3jv9b_: 3jv9 B:

Lineage for d3jv9b_ (3jv9 B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
   Similar in architecture to the superfamily I but partly differs in topology

5. Family c.94.1.0: automated matches [191309] (1 protein)
   not a true family

6. Protein automated matches [190039] (161 species)
   not a true protein

7. Species Neisseria meningitidis [TaxId:122586] [311302] (1 PDB entry)

8. Domain d3jv9b_: 3jv9 B: [305648]
   automated match to d4y0md_
   complexed with cl

Details for d3jv9b_

PDB Entry: 3jv9, 2.39 Å

PDB Description: The structure of a reduced form of OxyR from N. meningitidis

PDB Compounds: (B:) Transcriptional regulator, LysR family

SCOPe Domain Sequences for d3jv9b_:

Sequence, based on SEQRES records:

>d3jv9b_ c.94.1.0 (B:) automated matches {Neisseria meningitidis [TaxId: 122586]}
egafklgliftvapyllpklivslrrtapkmplmleenythtlteslkrgdvdaiivaep
fqepgivteplydepffvivpkghsfeeldavsprmlgeeqvllltegncmrdqvlsscs
elaakqriqgltntlqgssintirhmvasglaisvlpataltendhmlfsiipfegtpps
rrvvlayrrnfvrpkalsamkaaimqsqlhgvsfic

Sequence, based on observed residues (ATOM records):

>d3jv9b_ c.94.1.0 (B:) automated matches {Neisseria meningitidis [TaxId: 122586]}
egafklgliftvapyllpklivslrrtapkmplmleenythtlteslkrgdvdaiivaep
fqepgivteplydepffvivpkghsfeeldavsprmlgeeqvllltegncmrdqvlssct
ntlqgssintirhmvasglaisvlpataltendhmlfsiipfegtppsrrvvlayrrnfv
rpkalsamkaaimqsqlhgvsfic

Timeline for d3jv9b_:

• d3jv9b_ first appeared in SCOPe 2.06
  
• d3jv9b_ appears in SCOPe 2.07