Lineage for d2herb_ (2her B:)

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2731436Fold a.128: Terpenoid synthases [48575] (1 superfamily)
    multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers
  4. 2731437Superfamily a.128.1: Terpenoid synthases [48576] (6 families) (S)
    duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J
  5. 2731887Family a.128.1.0: automated matches [196408] (1 protein)
    not a true family
  6. 2731888Protein automated matches [196409] (46 species)
    not a true protein
  7. 2731921Species Cryptosporidium parvum [TaxId:5807] [255516] (2 PDB entries)
  8. 2731923Domain d2herb_: 2her B: [303966]
    automated match to d2q58b_
    complexed with mg, zol

Details for d2herb_

PDB Entry: 2her (more details), 2.37 Å

PDB Description: Cryptosporidium parvum putative polyprenyl pyrophosphate synthase (cgd4_2550) in complex with zoledronate
PDB Compounds: (B:) farnesyl pyrophosphate synthase

SCOPe Domain Sequences for d2herb_:

Sequence, based on SEQRES records: (download)

>d2herb_ a.128.1.0 (B:) automated matches {Cryptosporidium parvum [TaxId: 5807]}
ydytdfinyydkfkvivynvlkklplndeirkpvieyylncidynvkkgkhirgkilvli
sslssaysnikrdsiyllgwvveaiqaliliaddimdsgkfrrgapcwyivhgqsnaind
ifflkmlslslifelssvfgndivmkiqkiynesifftvlgqhldlsyfdlskadkiser
yfsmvemktsrytfympvffgltlseiqvssaqlnlieailyklgefyqvhndvsdylfn
dsnaddicrfkltwplqksfeiadeemklkisenygknsslvkdcynllkinehyleyqr
naldyliklvkditddslqkvfihlihqiselitnsrsn

Sequence, based on observed residues (ATOM records): (download)

>d2herb_ a.128.1.0 (B:) automated matches {Cryptosporidium parvum [TaxId: 5807]}
ydytdfinyydkfkvivynvlkklpvieyylncidynvkkgkhirgkilvlisslssays
nikrdsiyllgwvveaiqaliliaddimdsgkfrrgapcwyivhgqsnaindifflkmls
lslifelssvfgndivmkiqkiynesifftvlgqhldlsyfdlskadkiseryfsmvemk
tsrytfympvffgltlseiqvssaqlnlieailyklgefyqvhndvsdylfndsnaddic
rfkltwplqksfeiadeemklkisenygknsslvkdcynllkinehyleyqrnaldylik
lvkditddslqkvfihlihqiselitnsrsn

SCOPe Domain Coordinates for d2herb_:

Click to download the PDB-style file with coordinates for d2herb_.
(The format of our PDB-style files is described here.)

Timeline for d2herb_: