SCOPe 2.06: Domain d1j5va1: 1j5v A:1-330

Lineage for d1j5va1 (1j5v A:1-330)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.72: Ribokinase-like [53612] (3 superfamilies)
   core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
   potential superfamily: members of this fold have similar functions but different ATP-binding sites

4. Superfamily c.72.1: Ribokinase-like [53613] (6 families)
   has extra strand located between strands 2 and 3

5. Family c.72.1.1: Ribokinase-like [53614] (10 proteins)
   automatically mapped to Pfam PF00294

6. Protein 2-keto-3-deoxygluconate kinase [75295] (2 species)

7. Species Thermotoga maritima, TM0067 [TaxId:2336] [75296] (2 PDB entries)

8. Domain d1j5va1: 1j5v A:1-330 [302533]
   Other proteins in same PDB: d1j5va2, d1j5vb2
   automated match to d2afbb_
   complexed with 2of, ni, ni1, ni3, of1, zn3

Details for d1j5va1

PDB Entry: 1j5v, 2.3 Å

PDB Description: Crystal structure of 2-keto-3-deoxygluconate kinase (TM0067) from Thermotoga maritima at 2.3 A resolution

PDB Compounds: (A:) 2-keto-3-deoxygluconate kinase

SCOPe Domain Sequences for d1j5va1:

Sequence, based on SEQRES records:

>d1j5va1 c.72.1.1 (A:1-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]}
mkvvtfgeimlrlsppdhkrifqtdsfdvtyggaeanvaaflaqmgldayfvtklpnnpl
gdaaaghlrkfgvktdyiarggnrigiyfleigasqrpskvvydrahsaiseakredfdw
ekildgarwfhfsgitpplgkelpliledalkvanekgvtvscdlnyrarlwtkeeaqkv
mipfmeyvdvlianeediekvlgisvegldlktgklnreayakiaeevtrkynfktvgit
lresisatvnywsvmvfengqphfsnryeihivdrvgagdsfagaliygslmgfdsqkka
efaaaasclkhtipgdfvvlsieeieklas

Sequence, based on observed residues (ATOM records):

>d1j5va1 c.72.1.1 (A:1-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]}
mkvvtfgeimlrlsppdhkrifqtdsfdvtyggaeanvaaflaqmgldayfvtklpnnpl
gdaaaghlrkfgvktdyiarggnrigiyfleigasqrpskvvydrahsaiseakredfdw
ekildgarwfhfsgitpplgkelpliledalkvanekgvtvscdlnyrarlwtkeeaqkv
mipfmeyvdvlianeediekvlgisnreayakiaeevtrkynfktvgitlresisatvny
wsvmvfengqphfsnryeihivdrvgagdsfagaliygslmgfdsqkkaefaaaasclkh
tipgdfvvlsieeieklas

Timeline for d1j5va1:

• d1j5va1 is new in SCOPe 2.06-stable
  
• d1j5va1 appears in SCOPe 2.07
  
• d1j5va1 appears in the current release, SCOPe 2.08