Lineage for d1aup_1 (1aup 205-449)

  1. Root: SCOP 1.67
  2. 383641Class c: Alpha and beta proteins (a/b) [51349] (130 folds)
  3. 387036Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 387037Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (11 families) (S)
  5. 388514Family c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain [51883] (10 proteins)
    extra N-terminal helix displaces the C-terminal helix (following strand 6) from its usual position creating a family nicotineamide-binding site
  6. 388515Protein Glutamate dehydrogenase [51884] (7 species)
  7. 388534Species Clostridium symbiosum [TaxId:1512] [51885] (4 PDB entries)
  8. 388540Domain d1aup_1: 1aup 205-449 [30222]
    Other proteins in same PDB: d1aup_2
    mutant

Details for d1aup_1

PDB Entry: 1aup (more details), 2.5 Å

PDB Description: glutamate dehydrogenase

SCOP Domain Sequences for d1aup_1:

Sequence, based on SEQRES records: (download)

>d1aup_1 c.2.1.7 (205-449) Glutamate dehydrogenase {Clostridium symbiosum}
rpeatgygsvyyveavmkhendtlvgktvalagfgnvawgaakklaelgakavtlsgpdg
yiydpegitteekinymlemrasgrnkvqdyadkfgvqffpgekpwgqkvdiimpcatqn
dvdleqakkivannvkyyievanmpttnealrflmqqpnmvvapskavnaggvlvvgfem
sqnserlswtaeevdsklhqvmtdihdgsaaaaeryglgynlvaganivgfqkiadamma
qgiaw

Sequence, based on observed residues (ATOM records): (download)

>d1aup_1 c.2.1.7 (205-449) Glutamate dehydrogenase {Clostridium symbiosum}
rpeatgygsvyyveavmkhendtlvgktvalagfgnvawgaakklaelgakavtlsgpdg
yiydpegitteekinymlemrasgrnkvqdyadkfgvqffpgekpwgqkvdiimpcatqn
dvdleqakkivannvkyyievanmpttnealrflmqqpnmvvapskavnaggvlvvgfet
aeevdsklhqvmtdihdgsaaaaeryglgynlvaganivgfqkiadammaqgiaw

SCOP Domain Coordinates for d1aup_1:

Click to download the PDB-style file with coordinates for d1aup_1.
(The format of our PDB-style files is described here.)

Timeline for d1aup_1:

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Domains from same chain:
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d1aup_2