SCOP 1.67: Domain d1bmda1: 1bmd A:0-154

Lineage for d1bmda1 (1bmd A:0-154)

1. Root: SCOP 1.67

2. Class c: Alpha and beta proteins (a/b) [51349] (130 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (11 families)

5. Family c.2.1.5: LDH N-terminal domain-like [51848] (7 proteins)

6. Protein Malate dehydrogenase [51849] (11 species)

7. Species Thermus flavus [TaxId:274] [51854] (2 PDB entries)

8. Domain d1bmda1: 1bmd A:0-154 [30139]
   Other proteins in same PDB: d1bmda2, d1bmdb2

Details for d1bmda1

PDB Entry: 1bmd, 1.9 Å

PDB Description: determinants of protein thermostability observed in the 1.9 angstroms crystal structure of malate dehydrogenase from the thermophilic bacterium thermus flavus

SCOP Domain Sequences for d1bmda1:

Sequence; same for both SEQRES and ATOM records:

>d1bmda1 c.2.1.5 (A:0-154) Malate dehydrogenase {Thermus flavus}
mkapvrvavtgaagqigysllfriaagemlgkdqpvilqlleipqamkalegvvmeledc
afpllagleatddpdvafkdadyallvgaaprkagmerrdllqvngkifteqgralaeva
kkdvkvlvvgnpantnaliayknapglnprnftam

Timeline for d1bmda1:

• d1bmda1 first appeared (with stable ids) in SCOP 1.55
  
• d1bmda1 appears in SCOP 1.65
  
• d1bmda1 appears in SCOP 1.69
  
• d1bmda1 appears in the current release, SCOPe 2.08