SCOPe 2.08: Domain d1cf2r1: 1cf2 R:1-138,R:304-336

Lineage for d1cf2r1 (1cf2 R:1-138,R:304-336)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800] (22 proteins)
   family members also share a common alpha+beta fold in C-terminal domain

6. Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [51801] (21 species)

7. Species Methanothermus fervidus [TaxId:2180] [51807] (1 PDB entry)

8. Domain d1cf2r1: 1cf2 R:1-138,R:304-336 [29997]
   Other proteins in same PDB: d1cf2o2, d1cf2p2, d1cf2q2, d1cf2r2
   complexed with nap, so4

Details for d1cf2r1

PDB Entry: 1cf2, 2.1 Å

PDB Description: three-dimensional structure of d-glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic archaeon methanothermus fervidus

PDB Compounds: (R:) protein (glyceraldehyde-3-phosphate dehydrogenase)

SCOPe Domain Sequences for d1cf2r1:

Sequence; same for both SEQRES and ATOM records:

>d1cf2r1 c.2.1.3 (R:1-138,R:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Methanothermus fervidus [TaxId: 2180]}
mkavaingygtvgkrvadaiaqqddmkvigvsktrpdfearmalkkgydlyvaipervkl
fekagievagtvddmldeadividctpegigaknlkmykekgikaifqggekhediglsf
nslsnyeesygkdytrvvXivpenvdavrailemeedkyksinktnkamnil

Timeline for d1cf2r1:

• d1cf2r1 first appeared (with stable ids) in SCOP 1.55
  
• d1cf2r1 appears in SCOPe 2.07