SCOPe 2.06: Domain d4o4lf2: 4o4l F:77-378

Lineage for d4o4lf2 (4o4l F:77-378)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families)

5. Family d.142.1.10: Tubulin tyrosine ligase (TTL) C-terminal domain-like [310626] (2 proteins)
   Pfam PF03133; PubMed 22020298

6. Protein automated matches [310890] (2 species)
   not a true protein

7. Species Chicken (Gallus gallus) [TaxId:9031] [311406] (3 PDB entries)

8. Domain d4o4lf2: 4o4l F:77-378 [299944]
   Other proteins in same PDB: d4o4la1, d4o4la2, d4o4lb1, d4o4lb2, d4o4lc1, d4o4lc2, d4o4ld1, d4o4ld2, d4o4le_, d4o4lf1
   automated match to d3tiia2
   complexed with ca, ep, gdp, gtp, mes, mg, pou

Details for d4o4lf2

PDB Entry: 4o4l, 2.2 Å

PDB Description: Tubulin-Peloruside A-Epothilone A complex

PDB Compounds: (F:) Tubulin-tyrosine ligase

SCOPe Domain Sequences for d4o4lf2:

Sequence, based on SEQRES records:

>d4o4lf2 d.142.1.10 (F:77-378) automated matches {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptnlktpvapaqngirhlinntrtderevflaayn
rrregregnvwiakssagakgegilisseaselldfideqgqvhviqkylekplllepgh
rkfdirswvlvdhlyniylyregvlrtssepynsanfqdktchltnhciqkeysknygry
eegnemffeefnqylmdalnttlensillqikhiirsclmciepaistkhlhyqsfqlfg
fdfmvdeelkvwlievngapacaqklyaelcqgivdvaissvfpladtgqktsqptsifi
kl

Sequence, based on observed residues (ATOM records):

>d4o4lf2 d.142.1.10 (F:77-378) automated matches {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptnltderevflaaynrrregregnvwiakssaga
kgegilisseaselldfideqgqvhviqkylekplllepghrkfdirswvlvdhlyniyl
yregvlrtssepynsanfqdktchltnhciqkeysknygryeegnemffeefnqylmdal
nttlensillqikhiirsclmciepaistkhlhyqsfqlfgfdfmvdeelkvwlievnga
pacaqklyaelcqgivdvaissvfplaptsifikl

Timeline for d4o4lf2:

• d4o4lf2 is new in SCOPe 2.06-stable
  
• d4o4lf2 appears in SCOPe 2.07
  
• d4o4lf2 appears in the current release, SCOPe 2.08