SCOPe 2.06: Domain d1aa1l1: 1aa1 L:148-463

Lineage for d1aa1l1 (1aa1 L:148-463)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families)
   automatically mapped to Pfam PF00016

5. Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 proteins)
   N-terminal domain is alpha+beta

6. Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651] (12 species)

7. Species Spinach (Spinacia oleracea) [TaxId:3562] [51653] (11 PDB entries)

8. Domain d1aa1l1: 1aa1 L:148-463 [29347]
   Other proteins in same PDB: d1aa1b2, d1aa1c_, d1aa1e2, d1aa1f_, d1aa1h2, d1aa1i_, d1aa1l2, d1aa1s_
   complexed with 3pg, mg

Details for d1aa1l1

PDB Entry: 1aa1, 2.2 Å

PDB Description: activated spinach rubisco in complex with the product 3-phosphoglycerate

PDB Compounds: (L:) ribulose bisphosphate carboxylase (large chain)

SCOPe Domain Sequences for d1aa1l1:

Sequence, based on SEQRES records:

>d1aa1l1 c.1.14.1 (L:148-463) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Spinach (Spinacia oleracea) [TaxId: 3562]}
fqgpphgiqverdklnkygrpllgctikpklglsaknygravyeclrggldftkddenvn
sqpfmrwrdrflfcaealykaqaetgeikghylnatagtcedmmkravfarelgvpivmh
dyltggftanttlshycrdnglllhihramhavidrqknhgmhfrvlakalrlsggdhih
sgtvvgklegerditlgfvdllrddytekdrsrgiyftqswvstpgvlpvasggihvwhm
palteifgddsvlqfgggtlghpwgnapgavanrvaleacvqarnegrdlaregntiire
atkwspelaaacevwk

Sequence, based on observed residues (ATOM records):

>d1aa1l1 c.1.14.1 (L:148-463) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Spinach (Spinacia oleracea) [TaxId: 3562]}
fqgpphgiqverdklnkygrpllgctikpklglsaknygravyeclrggldftkddenvn
sqpfmrwrdrflfcaealykaqaetgeikghylnatagtcedmmkravfarelgvpivmh
dyltggftanttlshycrdnglllhihramhavidrqknhgmhfrvlakalrlsggdhih
sgtvverditlgfvdllrddytekdrsrgiyftqswvstpgvlpvasggihvwhmpalte
ifgddsvlqfgggtlghpwgnapgavanrvaleacvqarnegrdlaregntiireatkws
pelaaacevwk

Timeline for d1aa1l1:

• d1aa1l1 first appeared (with stable ids) in SCOP 1.55
  
• d1aa1l1 appears in SCOPe 2.05
  
• d1aa1l1 appears in SCOPe 2.07
  
• d1aa1l1 appears in the current release, SCOPe 2.08