SCOPe 2.06: Domain d1pkma2: 1pkm A:12-115,A:218-395

Lineage for d1pkma2 (1pkm A:12-115,A:218-395)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.12: Phosphoenolpyruvate/pyruvate domain [51621] (8 families)

5. Family c.1.12.1: Pyruvate kinase [51622] (1 protein)

6. Protein Pyruvate kinase, N-terminal domain [51623] (6 species)
   this domain is interrupted by an all-beta domain
   C-terminal domain is alpha/beta

7. Species Cat (Felis catus) [TaxId:9685] [51624] (1 PDB entry)

8. Domain d1pkma2: 1pkm A:12-115,A:218-395 [29254]
   Other proteins in same PDB: d1pkma1, d1pkma3

Details for d1pkma2

PDB Entry: 1pkm, 2.6 Å

PDB Description: the refined three-dimensional structure of cat muscle (m1) pyruvate kinase, at a resolution of 2.6 angstroms

PDB Compounds: (A:) m1 pyruvate kinase

SCOPe Domain Sequences for d1pkma2:

Sequence; same for both SEQRES and ATOM records:

>d1pkma2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Cat (Felis catus) [TaxId: 9685]}
iqtqqlhaamadtflehmcrldidsppitarntgiictigpasrsveilkemiksgmnva
rlnfshgtheyhaetiknvraatesfasdpiryrpvavaldtkgXpavsekdiqdlkfgv
eqdvdmvfasfirkasdvhevrkvlgekgknikiiskienhegvrrfdeileasdgimva
rgdlgieipaekvflaqkmmigrcnragkpvicatqmlesmikkprptraegsdvanavl
dgadcimlsgetakgdypleavrmqhliareaeaamfhrklfe

Timeline for d1pkma2:

• d1pkma2 first appeared (with stable ids) in SCOP 1.55, called d1pkm_2
  
• d1pkma2 appears in SCOPe 2.05
  
• d1pkma2 appears in SCOPe 2.07
  
• d1pkma2 appears in the current release, SCOPe 2.08