SCOPe 2.04: Domain d6taaa2: 6taa A:1-381

Lineage for d6taaa2 (6taa A:1-381)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
   members of the family may contain various insert subdomains
   in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

6. Protein Fungal alpha-amylases [51462] (2 species)

7. Species Aspergillus oryzae, Taka-amylase [TaxId:5062] [51464] (8 PDB entries)

8. Domain d6taaa2: 6taa A:1-381 [28766]
   Other proteins in same PDB: d6taaa1
   complexed with ca

Details for d6taaa2

PDB Entry: 6taa, 2.1 Å

PDB Description: structure and molecular model refinement of aspergillus oryzae (taka) alpha-amylase: an application of the simulated-annealing method

PDB Compounds: (A:) alpha-amylase

SCOPe Domain Sequences for d6taaa2:

Sequence; same for both SEQRES and ATOM records:

>d6taaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]}
atpadwrsqsiyflltdrfartdgsttatcntadqkycggtwqgiidkldyiqgmgftai
witpvtaqlpqttaygdayhgywqqdiyslnenygtaddlkalssalhergmylmvdvva
nhmgydgagssvdysvfkpfssqdyfhpfcfiqnyedqtqvedcwlgdntvslpdldttk
dvvknewydwvgslvsnysidglridtvkhvqkdfwpgynkaagvycigevldgdpaytc
pyqnvmdgvlnypiyypllnafkstsgsmddlynmintvksdcpdstllgtfvenhdnpr
fasytndialaknvaafiilndgipiiyagqeqhyaggndpanreatwlsgyptdselyk
liasanairnyaiskdtgfvt

Timeline for d6taaa2:

• d6taaa2 first appeared (with stable ids) in SCOP 1.55, called d6taa_2
  
• d6taaa2 appears in SCOPe 2.03
  
• d6taaa2 appears in SCOPe 2.05
  
• d6taaa2 appears in the current release, SCOPe 2.08