Lineage for d1tcmb4 (1tcm B:1-406)

  1. Root: SCOPe 2.06
  2. 2089713Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2089714Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2093018Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2093019Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2093248Protein Cyclodextrin glycosyltransferase [51452] (5 species)
    contains two more all-beta domains, one is Immunoglobulin-like and the other is trasthyretin-like
  7. 2093249Species Bacillus circulans, different strains [TaxId:1397] [51453] (36 PDB entries)
  8. 2093280Domain d1tcmb4: 1tcm B:1-406 [28728]
    Other proteins in same PDB: d1tcma1, d1tcma2, d1tcma3, d1tcmb1, d1tcmb2, d1tcmb3
    complexed with ca; mutant

Details for d1tcmb4

PDB Entry: 1tcm (more details), 2.2 Å

PDB Description: cyclodextrin glycosyltransferase w616a mutant from bacillus circulans strain 251
PDB Compounds: (B:) cyclodextrin glycosyltransferase

SCOPe Domain Sequences for d1tcmb4:

Sequence; same for both SEQRES and ATOM records: (download)

>d1tcmb4 c.1.8.1 (B:1-406) Cyclodextrin glycosyltransferase {Bacillus circulans, different strains [TaxId: 1397]}
apdtsvsnkqnfstdviyqiftdrfsdgnpannptgaafdgtctnlrlycggdwqgiink
indgyltgmgvtaiwisqpveniysiinysgvnntayhgywardfkktnpaygtiadfqn
liaaahaknikviidfapnhtspassdqpsfaengrlydngtllggytndtqnlfhhngg
tdfsttengiyknlydladlnhnnstvdvylkdaikmwldlgidgirmdavkhmpfgwqk
sfmaavnnykpvftfgewflgvnevspenhkfanesgmslldfrfaqkvrqvfrdntdnm
yglkamlegsaadyaqvddqvtfidnhdmerfhasnanrrkleqalaftltsrgvpaiyy
gteqymsggtdpdnraripsfststtayqviqklaplrkcnpaiay

SCOPe Domain Coordinates for d1tcmb4:

Click to download the PDB-style file with coordinates for d1tcmb4.
(The format of our PDB-style files is described here.)

Timeline for d1tcmb4: