SCOP 1.69: Domain d5cgt_4: 5cgt 1-406

Lineage for d5cgt_4 (5cgt 1-406)

1. Root: SCOP 1.69

2. Class c: Alpha and beta proteins (a/b) [51349] (136 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (31 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (11 families)

5. Family c.1.8.1: Amylase, catalytic domain [51446] (24 proteins)
   members of the family may contain various insert subdomains
   in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

6. Protein Cyclodextrin glycosyltransferase [51452] (5 species)
   contains two more all-beta domains, one is Immunoglobulin-like and the other is trasthyretin-like

7. Species Bacillus circulans, different strains [TaxId:1397] [51453] (36 PDB entries)

8. Domain d5cgt_4: 5cgt 1-406 [28718]
   Other proteins in same PDB: d5cgt_1, d5cgt_2, d5cgt_3

Details for d5cgt_4

PDB Entry: 5cgt, 2.5 Å

PDB Description: maltotriose complex of preconditioned cyclodextrin glycosyltransferase mutant

SCOP Domain Sequences for d5cgt_4:

Sequence; same for both SEQRES and ATOM records:

>d5cgt_4 c.1.8.1 (1-406) Cyclodextrin glycosyltransferase {Bacillus circulans, different strains}
dpdtavtnkqsfstdviyqvftdrfldgnpsnnptgaaydatcsnlklycggdwqglink
indnyfsdlgvtalwisqpvenifatinysgvtntayhgywardfkktnpyfgtmadfqn
littahakgikividfapnhtspametdtsfaengrlydngtlvggytndtngyfhhngg
sdfsslengiyknlydladfnhnnatidkyfkdaiklwldmgvdgirvaavkhmplgwqk
swmssiyahkpvftfgewflgsaasdadntdfanksgmslldfrfnsavrnvfrdntsnm
yaldsminstatdynqvndqvtfidnhdmdrfktsavnnrrleqalaftltsrgvpaiyy
gteqyltgngdpdnrakmpsfsksttafnvisklaplrksnpaiay

Timeline for d5cgt_4:

• d5cgt_4 first appeared (with stable ids) in SCOP 1.55
  
• d5cgt_4 appears in SCOP 1.67
  
• d5cgt_4 appears in SCOP 1.71
  
• d5cgt_4 appears in the current release, SCOPe 2.08, called d5cgta4