SCOPe 2.04: Domain d7odca2: 7odc A:44-283

Lineage for d7odca2 (7odc A:44-283)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.6: PLP-binding barrel [51419] (2 families)
   circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand

5. Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (3 proteins)

6. Protein Eukaryotic ornithine decarboxylase [51423] (3 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [51425] (1 PDB entry)

8. Domain d7odca2: 7odc A:44-283 [28650]
   Other proteins in same PDB: d7odca1
   complexed with plp

Details for d7odca2

PDB Entry: 7odc, 1.6 Å

PDB Description: crystal structure ornithine decarboxylase from mouse, truncated 37 residues from the c-terminus, to 1.6 angstrom resolution

PDB Compounds: (A:) protein (ornithine decarboxylase)

SCOPe Domain Sequences for d7odca2:

Sequence, based on SEQRES records:

>d7odca2 c.1.6.1 (A:44-283) Eukaryotic ornithine decarboxylase {Mouse (Mus musculus) [TaxId: 10090]}
dlgdilkkhlrwlkalprvtpfyavkcndsraivstlaaigtgfdcaskteiqlvqglgv
paerviyanpckqvsqikyaasngvqmmtfdseielmkvarahpkaklvlriatddskav
crlsvkfgatlktsrlllerakelnidvigvsfhvgsgctdpdtfvqavsdarcvfdmat
evgfsmhlldigggfpgsedtklkfeeitsvinpaldkyfpsdsgvriiaepgryyvasa

Sequence, based on observed residues (ATOM records):

>d7odca2 c.1.6.1 (A:44-283) Eukaryotic ornithine decarboxylase {Mouse (Mus musculus) [TaxId: 10090]}
dlgdilkkhlrwlkalprvtpfyavkcndsraivstlaaigtgfdcaskteiqlvqglgv
paerviyanpckqvsqikyaasngvqmmtfdseielmkvarahpkaklvlriatkfgatl
ktsrlllerakelnidvigvsfhvgsgctdpdtfvqavsdarcvfdmatevgfsmhlldi
gggfpgsedtklkfeeitsvinpaldkyfpsdsgvriiaepgryyvasa

Timeline for d7odca2:

• d7odca2 first appeared (with stable ids) in SCOP 1.55
  
• d7odca2 appears in SCOPe 2.03
  
• d7odca2 appears in SCOPe 2.05
  
• d7odca2 appears in the current release, SCOPe 2.08