SCOPe 2.06: Domain d1dvjc1: 1dvj C:9-228

Lineage for d1dvjc1 (1dvj C:9-228)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families)

5. Family c.1.2.3: Decarboxylase [51375] (4 proteins)

6. Protein Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) [51376] (7 species)

7. Species Methanobacterium thermoautotrophicum [TaxId:145262] [51379] (16 PDB entries)

8. Domain d1dvjc1: 1dvj C:9-228 [28548]
   Other proteins in same PDB: d1dvja2, d1dvjc2
   complex with 6-azaUMP
   complexed with up6

Details for d1dvjc1

PDB Entry: 1dvj, 1.5 Å

PDB Description: crystal structure of orotidine monophosphate decarboxylase complexed with 6-azaump

PDB Compounds: (C:) orotidine 5'-phosphate decarboxylase

SCOPe Domain Sequences for d1dvjc1:

Sequence; same for both SEQRES and ATOM records:

>d1dvjc1 c.1.2.3 (C:9-228) Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) {Methanobacterium thermoautotrophicum [TaxId: 145262]}
mdvmnrlilamdlmnrddalrvtgevreyidtvkigyplvlsegmdiiaefrkrfgcrii
adfkvadipetnekicratfkagadaiivhgfpgadsvraclnvaeemgrevflltemsh
pgaemfiqgaadeiarmgvdlgvknyvgpstrperlsrlreiigqdsflispgvgaqggd
pgetlrfadaiivgrsiyladnpaaaaagiiesikdllip

Timeline for d1dvjc1:

• d1dvjc1 first appeared (with stable ids) in SCOP 1.55, called d1dvjc_
  
• d1dvjc1 was called d1dvjc_ in SCOPe 2.05
  
• d1dvjc1 appears in SCOPe 2.07
  
• d1dvjc1 appears in the current release, SCOPe 2.08