SCOPe 2.05: Domain d5dk8b_: 5dk8 B:

Lineage for d5dk8b_ (5dk8 B:)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (9 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (7 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54239] (149 PDB entries)
   Uniprot P62988
   identical sequence in many other species

8. Domain d5dk8b_: 5dk8 B: [280315]
   automated match to d2murb_
   complexed with mg

Details for d5dk8b_

PDB Entry: 5dk8, 1.32 Å

PDB Description: human ubiquitin in the p1 space group

PDB Compounds: (B:) Polyubiquitin-B

SCOPe Domain Sequences for d5dk8b_:

Sequence; same for both SEQRES and ATOM records:

>d5dk8b_ d.15.1.1 (B:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
hhqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdy
niqkestlhlvlrlr

Timeline for d5dk8b_:

• d5dk8b_ is new in SCOPe 2.05-stable
  
• d5dk8b_ is called d5dk8b1 in SCOPe 2.06
  
• d5dk8b_ appears in the current release, SCOPe 2.08, called d5dk8b1