SCOPe 2.06: Domain d4yomb1: 4yom B:13-342

Lineage for d4yomb1 (4yom B:13-342)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.144: Protein kinase-like (PK-like) [56111] (1 superfamily)
   consists of two alpha+beta domains, C-terminal domain is mostly alpha helical

4. Superfamily d.144.1: Protein kinase-like (PK-like) [56112] (8 families)
   shares functional and structural similarities with the ATP-grasp fold and PIPK

5. Family d.144.1.0: automated matches [191359] (1 protein)
   not a true family

6. Protein automated matches [190417] (25 species)
   not a true protein

7. Species Mouse (Mus musculus) [TaxId:10090] [194605] (24 PDB entries)

8. Domain d4yomb1: 4yom B:13-342 [279987]
   Other proteins in same PDB: d4yomb2
   automated match to d1zmub_
   complexed with edo

Details for d4yomb1

PDB Entry: 4yom, 2.49 Å

PDB Description: structure of sad kinase

PDB Compounds: (B:) Serine/threonine-protein kinase BRSK2

SCOPe Domain Sequences for d4yomb1:

Sequence, based on SEQRES records:

>d4yomb1 d.144.1.0 (B:13-342) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
haqyvgpyrlektlgkgqtglvklgihcvtcqkvaikivnreklsesvlmkvereiailk
liehphvlklhdvyenkkylylvlehvsggelfdylvkkgrltpkearkffrqiisaldf
chshsichrdlkpenllldernniriadfgmaslqvgdslletscgsphyacpevirgek
ydgrkadvwscgvilfallvgalpfdddnlrqllekvkrgvfhmphfippdcqsllrgmi
evdaarrltlehiqkhiwyiggknepepeqpiprkvqirslpsledidpdvldsmhslgc
frdrnkllqdllseeenqekmiyfllldrk

Sequence, based on observed residues (ATOM records):

>d4yomb1 d.144.1.0 (B:13-342) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
haqyvgpyrlektlgkgqtglvklgihcvtcqkvaikivnreklsesvlmkvereiailk
liehphvlklhdvyenkkylylvlehvsggelfdylvkkgrltpkearkffrqiisaldf
chshsichrdlkpenllldernniriadfgmaslqvgdslletscgsphyacpevirgek
ydgrkadvwscgvilfallvgalpfdddnlrqllekvkrgvfhmphfippdcqsllrgmi
evdaarrltlehiqkhiwyiggknkvqirslpsledidpdvldsmhslgcfrdrnkllqd
llseeenqekmiyfllldrk

Timeline for d4yomb1:

• d4yomb1 first appeared in SCOPe 2.05, called d4yomb_
  
• d4yomb1 appears in SCOPe 2.07
  
• d4yomb1 appears in the current release, SCOPe 2.08