SCOPe 2.05: Domain d4xdcb3: 4xdc B:210-579

Lineage for d4xdcb3 (4xdc B:210-579)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.96: Fe-only hydrogenase [53919] (1 superfamily)
   consist of two intertwined domains; contains partial duplication

4. Superfamily c.96.1: Fe-only hydrogenase [53920] (1 family)
   automatically mapped to Pfam PF02906

5. Family c.96.1.1: Fe-only hydrogenase [53921] (3 proteins)

6. Protein automated matches [279207] (1 species)
   not a true protein

7. Species Clostridium pasteurianum [TaxId:1501] [279208] (5 PDB entries)

8. Domain d4xdcb3: 4xdc B:210-579 [279368]
   Other proteins in same PDB: d4xdca1, d4xdca2, d4xdcb1, d4xdcb2
   automated match to d3c8ya1
   complexed with 402, fes, mg, sf4

Details for d4xdcb3

PDB Entry: 4xdc, 1.63 Å

PDB Description: active semisynthetic [fefe]-hydrogenase cpi with aza-dithiolato- bridged [2fe] cofactor

PDB Compounds: (B:) Iron hydrogenase 1

SCOPe Domain Sequences for d4xdcb3:

Sequence; same for both SEQRES and ATOM records:

>d4xdcb3 c.96.1.1 (B:210-579) automated matches {Clostridium pasteurianum [TaxId: 1501]}
hmdrvknalnapekhvivamapsvrasigelfnmgfgvdvtgkiytalrqlgfdkifdin
fgadmtimeeatelvqrienngpfpmftsccpgwvrqaenyypellnnlssakspqqifg
tasktyypsisgldpknvftvtvmpctskkfeadrpqmekdglrdidavittrelakmik
dakipfakledseadpamgeysgagaifgatggvmeaalrsakdfaenaeledieykqvr
glngikeaeveinnnkynvavingasnlfkfmksgminekqyhfievmachggcvngggq
phvnpkdlekvdikkvrasvlynqdehlskrkshentalvkmyqnyfgkpgegraheilh
fkykksawsh

Timeline for d4xdcb3:

• d4xdcb3 is new in SCOPe 2.05-stable
  
• d4xdcb3 appears in SCOPe 2.06
  
• d4xdcb3 appears in the current release, SCOPe 2.08