SCOPe 2.05: Domain d5cq1a_: 5cq1 A:

Lineage for d5cq1a_ (5cq1 A:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
   members of the family may contain various insert subdomains
   in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

6. Protein automated matches [190099] (22 species)
   not a true protein

7. Species Arabidopsis thaliana [TaxId:3702] [278910] (6 PDB entries)

8. Domain d5cq1a_: 5cq1 A: [278920]
   automated match to d1x1na1
   complexed with bgc, edo, glc

Details for d5cq1a_

PDB Entry: 5cq1, 2.3 Å

PDB Description: disproportionating enzyme 1 from arabidopsis - cycloamylose soak

PDB Compounds: (A:) 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic

SCOPe Domain Sequences for d5cq1a_:

Sequence, based on SEQRES records:

>d5cq1a_ c.1.8.1 (A:) automated matches {Arabidopsis thaliana [TaxId: 3702]}
svgedfpseyeqwlpvpdpesrrragvllhptsfrgphgigdlgeeafrfidwlhstgcs
vwqvlplvppdeggspyagqdancgntllisldelvkdgllikdelpqpidadsvnyqta
nklksplitkaakrlidgngelksklldfrndpsiscwledaayfaaidntlnayswfew
peplknrhlsaleaiyesqkefidlfiakqflfqrqwqkvreyarrqgvdimgdmpiyvg
yhsadvwankkhfllnkkgfpllvsgvppdlfsetgqlwgsplydwkamesdqyswwvnr
irraqdlydecridhfrgfagfwavpseakvamvgrwkvgpgkslfdaiskgvgkikiia
edlgvitkdvvelrksigapgmavlqfafgggadnphlphnhevnqvvysgthdndtirg
wwdtldqeekskamkylsiageddiswsviqaafsstaqtaiipmqdilglgssarmntp
atevgnwgwripsstsfdnletesdrlrdllslygrl

Sequence, based on observed residues (ATOM records):

>d5cq1a_ c.1.8.1 (A:) automated matches {Arabidopsis thaliana [TaxId: 3702]}
svgedfpseyeqwlpvpdpesrrragvllhptsfrgphgigdlgeeafrfidwlhstgcs
vwqvlplvppdeggspyagqdancgntllisldelvkdgllikdelpqpidadsvnyqta
nklksplitkaakrlidgngelksklldfrndpsiscwledaayfaaidntlnayswfew
peplknrhlsaleaiyesqkefidlfiakqflfqrqwqkvreyarrqgvdimgdmpiyvg
yhsadvwankkhfllnkkgfpllvsgvppsetgqlwgsplydwkamesdqyswwvnrirr
aqdlydecridhfrgfagfwavpseakvamvgrwkvgpgkslfdaiskgvgkikiiaedl
gvitkdvvelrksigapgmavlqfafgggadnphlphnhevnqvvysgthdndtirgwwd
tldqeekskamkylsiageddiswsviqaafsstaqtaiipmqdilglgssarmntpate
vgnwgwripsstsfdnletesdrlrdllslygrl

Timeline for d5cq1a_:

• d5cq1a_ is new in SCOPe 2.05-stable
  
• d5cq1a_ appears in SCOPe 2.06
  
• d5cq1a_ appears in the current release, SCOPe 2.08