SCOPe 2.05: Domain d4yhde_: 4yhd E:

Lineage for d4yhde_ (4yhd E:)

1. Root: SCOPe 2.05

2. Class f: Membrane and cell surface proteins and peptides [56835] (57 folds)

3. Fold f.6: Leukocidin-like [56958] (1 superfamily)
   subunit fold contains beta-sandwich of Ig-like (grerk-key) topology and a beta-ribbon arm that forms an oligomeric transmembrane barrel

4. Superfamily f.6.1: Leukocidin-like [56959] (3 families)

5. Family f.6.1.1: Leukocidin (pore-forming toxin) [56960] (5 proteins)
   heptameric fold contains barrel (n=14, S=14) formed by beta-ribbon arms, one from each subunit
   automatically mapped to Pfam PF07968

6. Protein automated matches [190904] (4 species)
   not a true protein

7. Species Staphylococcus aureus [TaxId:158878] [189747] (6 PDB entries)

8. Domain d4yhde_: 4yhd E: [278468]
   automated match to d3anza_
   complexed with cl; mutant

Details for d4yhde_

PDB Entry: 4yhd, 2.8 Å

PDB Description: staphylococcal alpha-hemolysin h35a mutant monomer

PDB Compounds: (E:) alpha-hemolysin

SCOPe Domain Sequences for d4yhde_:

Sequence, based on SEQRES records:

>d4yhde_ f.6.1.1 (E:) automated matches {Staphylococcus aureus [TaxId: 158878]}
niktgttdigsnttvktgdlvtydkengmakkvfysfiddknhnkkllvirtkgtiagqy
rvyseeganksglawpsafkvqlqlpdnevaqisdyyprnsidtkeymstltygfngnvt
gddtgkiggliganvsightlkyvqpdfktilesptdkkvgwkvifnnmvnqnwgpydrd
swnpvygnqlfmktrngsmkaaenfldpnkassllssgfspdfatvitmdrkaskqqtni
dviyervrddyqlhwtstnwkgtntkdkwtdrsserykidwekeemtn

Sequence, based on observed residues (ATOM records):

>d4yhde_ f.6.1.1 (E:) automated matches {Staphylococcus aureus [TaxId: 158878]}
niktgttdinttvktgdlvtydkengmakkvfysfiddknkllvirtkgtiagqyrvyse
eganksglawpsafkvqlqlpdnevaqisdyyprnsidtkeymstltygtgddtvsight
lkyvqpdfktilesptdkkvgwkvifnnmvnqnwgpydrdswnpvygnqlfmktrngsmk
aaenfldpnkassllssgfspdfatvitmdrkaskqqtnidviyervrddyqlhwtstnw
kgtntkdkwtdrsserykidwekeemtn

Timeline for d4yhde_:

• d4yhde_ is new in SCOPe 2.05-stable
  
• d4yhde_ appears in SCOPe 2.06
  
• d4yhde_ appears in the current release, SCOPe 2.08