Lineage for d4yhdg_ (4yhd G:)

  1. Root: SCOPe 2.05
  2. 1955192Class f: Membrane and cell surface proteins and peptides [56835] (57 folds)
  3. 1955986Fold f.6: Leukocidin-like [56958] (1 superfamily)
    subunit fold contains beta-sandwich of Ig-like (grerk-key) topology and a beta-ribbon arm that forms an oligomeric transmembrane barrel
  4. 1955987Superfamily f.6.1: Leukocidin-like [56959] (3 families) (S)
  5. 1955988Family f.6.1.1: Leukocidin (pore-forming toxin) [56960] (5 proteins)
    heptameric fold contains barrel (n=14, S=14) formed by beta-ribbon arms, one from each subunit
    automatically mapped to Pfam PF07968
  6. 1956047Protein automated matches [190904] (4 species)
    not a true protein
  7. 1956050Species Staphylococcus aureus [TaxId:158878] [189747] (6 PDB entries)
  8. 1956097Domain d4yhdg_: 4yhd G: [278467]
    automated match to d3anza_
    complexed with cl; mutant

Details for d4yhdg_

PDB Entry: 4yhd (more details), 2.8 Å

PDB Description: staphylococcal alpha-hemolysin h35a mutant monomer
PDB Compounds: (G:) alpha-hemolysin

SCOPe Domain Sequences for d4yhdg_:

Sequence, based on SEQRES records: (download)

>d4yhdg_ f.6.1.1 (G:) automated matches {Staphylococcus aureus [TaxId: 158878]}
iniktgttdigsnttvktgdlvtydkengmakkvfysfiddknhnkkllvirtkgtiagq
yrvyseeganksglawpsafkvqlqlpdnevaqisdyyprnsidtkeymstltygfngnv
tgddtgkiggliganvsightlkyvqpdfktilesptdkkvgwkvifnnmvnqnwgpydr
dswnpvygnqlfmktrngsmkaaenfldpnkassllssgfspdfatvitmdrkaskqqtn
idviyervrddyqlhwtstnwkgtntkdkwtdrsserykidwekeemtn

Sequence, based on observed residues (ATOM records): (download)

>d4yhdg_ f.6.1.1 (G:) automated matches {Staphylococcus aureus [TaxId: 158878]}
iniktgttdigsnttvktgdlvtydkengmakkvfysfiddknhnkkllvirtkgtiagq
yrvyseeganksglawpsafkvqlqlpdnevaqisdyyprnsidtkeymstltygfngnv
tgddtanvsightlkyvqpdfktilesptdkkvgwkvifnnmvnqnwgpydrdswnpvyg
nqlfmktrngsmkaaenfldpnkassllssgfspdfatvitmdrkaskqqtnidviyerv
rddyqlhwtstnwkgtntkdkwtdrsserykidwekeemtn

SCOPe Domain Coordinates for d4yhdg_:

Click to download the PDB-style file with coordinates for d4yhdg_.
(The format of our PDB-style files is described here.)

Timeline for d4yhdg_: