Lineage for d5c3qc_ (5c3q C:)

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1807020Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 1807787Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) (S)
    Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold
  5. 1808208Family b.82.2.0: automated matches [191672] (1 protein)
    not a true family
  6. 1808209Protein automated matches [191281] (9 species)
    not a true protein
  7. 1808237Species Neurospora crassa [TaxId:5141] [278316] (4 PDB entries)
  8. 1808240Domain d5c3qc_: 5c3q C: [278331]
    automated match to d1odna_
    complexed with akg, edo, ni, tdr

Details for d5c3qc_

PDB Entry: 5c3q (more details), 2.05 Å

PDB Description: crystal structure of the full-length neurospora crassa t7h in complex with alpha-kg and thymine (t)
PDB Compounds: (C:) Thymine dioxygenase

SCOPe Domain Sequences for d5c3qc_:

Sequence, based on SEQRES records: (download)

>d5c3qc_ b.82.2.0 (C:) automated matches {Neurospora crassa [TaxId: 5141]}
mekaavnedglviplidfskflegdetlkletakailhgfqtagfiylknipiqpdfreh
vfntsakffklpkekklevgwttpeanrgysapgrekvtqltdpaeiekirsaapdikes
yeigredepghpnpwpaeqddlvgfkstmnnffdqckalhievmraiavgmgidanyfds
fvdvgdnilrllhypavksevfkinpgqvragehtdygsitllfqdsrgglqvkspngqf
idatpientvvvnagdllarwsndtikstvhrvveppkqedvhpprysiayfcnpnhksy
ieaipgtyaaeserkyeginsgkylvqrlaat

Sequence, based on observed residues (ATOM records): (download)

>d5c3qc_ b.82.2.0 (C:) automated matches {Neurospora crassa [TaxId: 5141]}
mekaavnedglviplidfskflegdetlkletakailhgfqtagfiylknipiqpdfreh
vfntsakffklpkekklevgwttpeanrgysappdikesyeigredepghpnpwpaeqdd
lvgfkstmnnffdqckalhievmraiavgmgidanyfdsfvdvgdnilrllhypavksev
fkinpgqvragehtdygsitllfqdsrgglqvkspngqfidatpientvvvnagdllarw
sndtikstvhrvveppkqedvhpprysiayfcnpnhksyieaipgtyaaeserkyegins
gkylvqrlaat

SCOPe Domain Coordinates for d5c3qc_:

Click to download the PDB-style file with coordinates for d5c3qc_.
(The format of our PDB-style files is described here.)

Timeline for d5c3qc_: