SCOPe 2.05: Domain d4yz5b2: 4yz5 B:274-740

Lineage for d4yz5b2 (4yz5 B:274-740)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.68: 6-bladed beta-propeller [50938] (11 superfamilies)
   consists of six 4-stranded beta-sheet motifs; meander

4. Superfamily b.68.1: Sialidases [50939] (3 families)

5. Family b.68.1.0: automated matches [191452] (1 protein)
   not a true family

6. Protein automated matches [190692] (11 species)
   not a true protein

7. Species Streptococcus pneumoniae [TaxId:1313] [277389] (8 PDB entries)

8. Domain d4yz5b2: 4yz5 B:274-740 [277445]
   Other proteins in same PDB: d4yz5a1, d4yz5b1
   automated match to d2slia2
   complexed with dan, slt, so4

Details for d4yz5b2

PDB Entry: 4yz5, 2.27 Å

PDB Description: crystal structure of streptococcus pneumoniae nanc, in complex with 3- sialyllactose

PDB Compounds: (B:) Putative neuraminidase

SCOPe Domain Sequences for d4yz5b2:

Sequence, based on SEQRES records:

>d4yz5b2 b.68.1.0 (B:274-740) automated matches {Streptococcus pneumoniae [TaxId: 1313]}
ghliytandttgsnyfripvlytfsngrvfssidaryggthdflnkiniatsysddngkt
wtkpkltlafddfapvplewprevggrdlqisggatyidsvivekknkqvlmfadvmpag
vsfreatrkdsgykqidgnyylklrkqgdtdynytirengtvyddrtnrptefsvdknfg
ikqngnyltveqysvsfennkkteyrngtkvhmnifykdalfkvvptnyiayissndhge
swsaptllppimglnrnapylgpgrgiiesstgrilipsytgkesafiysddngaswkvk
vvplpsswsaeaqfvelspgviqaymrtnngkiayltskdagttwsapeylkfvsnpsyg
tqlsiinysqlidgkkavilstpnstngrkhgqiwiglinddntidwryhhdvdysnygy
systltelpnheiglmfekfdswsrnelhmknvvpyitfkiedlkkn

Sequence, based on observed residues (ATOM records):

>d4yz5b2 b.68.1.0 (B:274-740) automated matches {Streptococcus pneumoniae [TaxId: 1313]}
ghliytandttgsnyfripvlytfsngrvfssidaryggthdflnkiniatsysddngkt
wtkpkltlafddfapvplewprevggrdlqisggatyidsvivekknkqvlmfadvmpag
vsfreatrkdsgykqidgnyylklrkqgdtdynytirengtvyddrtnrptefsvdknfg
ikqngnyltveqysvsfkteyrngtkvhmnifykdalfkvvptnyiayissndhgeswsa
ptllppimglnrnapylgpgrgiiesstgrilipsytgkesafiysddngaswkvkvvpl
psswsaeaqfvelspgviqaymrtnngkiayltskdagttwsapeylkfvsnpsygtqls
iinysqlidgkkavilstpnstngrkhgqiwiglinddntidwryhhdvdysnygysyst
ltelpnheiglmfekfdswsrnelhmknvvpyitfkiedlkkn

Timeline for d4yz5b2:

• d4yz5b2 is new in SCOPe 2.05-stable
  
• d4yz5b2 appears in SCOPe 2.06
  
• d4yz5b2 appears in the current release, SCOPe 2.08