SCOPe 2.05: Domain d4rirb1: 4rir B:1-107

Lineage for d4rirb1 (4rir B:1-107)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.0: automated matches [191470] (1 protein)
   not a true family

6. Protein automated matches [190740] (26 species)
   not a true protein

7. Species Homo sapiens [TaxId:9606] [268548] (95 PDB entries)

8. Domain d4rirb1: 4rir B:1-107 [275988]
   Other proteins in same PDB: d4rirb2, d4rirl2
   automated match to d1lila1

Details for d4rirb1

PDB Entry: 4rir, 2.5 Å

PDB Description: structural analysis of the unmutated ancestor of the hiv-1 envelope v2 region antibody ch58 isolated from an rv144 hiv-1 vaccine efficacy trial vaccinee and associated with decreased transmission risk

PDB Compounds: (B:) CH58-UA Fab light chain

SCOPe Domain Sequences for d4rirb1:

Sequence; same for both SEQRES and ATOM records:

>d4rirb1 b.1.1.0 (B:1-107) automated matches {Homo sapiens [TaxId: 9606]}
nfmltqphsvsespgktvtisctrssgsiasnyvqwyqqrpgsspttviyednqrpsgvp
drfsgsidsssnsasltisglktedeadyycqsydssswvfgggtkltvlg

Timeline for d4rirb1:

• d4rirb1 is new in SCOPe 2.05-stable
  
• d4rirb1 appears in SCOPe 2.06
  
• d4rirb1 appears in the current release, SCOPe 2.08