SCOPe 2.05: Domain d4qzfa3: 4qzf A:303-510

Lineage for d4qzfa3 (4qzf A:303-510)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
   core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123

4. Superfamily d.218.1: Nucleotidyltransferase [81301] (16 families)

5. Family d.218.1.2: DNA polymerase beta-like [81300] (5 proteins)
   insert X in the core is an alpha-beta(2) unit; mixed 5-stranded sheet, order: 12543; contains extra C-terminal alpha+beta subdomain

6. Protein automated matches [254484] (3 species)
   not a true protein

7. Species Mouse (Mus musculus) [TaxId:10090] [256295] (28 PDB entries)

8. Domain d4qzfa3: 4qzf A:303-510 [273706]
   Other proteins in same PDB: d4qzfa1, d4qzfa2
   automated match to d1jmsa4
   protein/DNA complex; complexed with dct, mg, na; mutant

Details for d4qzfa3

PDB Entry: 4qzf, 2.6 Å

PDB Description: mouse tdt, f401a mutant, in complex with a dsb substrate, c-a base pair

PDB Compounds: (A:) DNA nucleotidylexotransferase

SCOPe Domain Sequences for d4qzfa3:

Sequence, based on SEQRES records:

>d4qzfa3 d.218.1.2 (A:303-510) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
vnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqll
hkvtdfwkqqglllycdilestfekfkqpsrkvdaldhaqkcflilkldhgrvhseksgq
qegkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtk
rvfleaeseeeifahlgldyiepwerna

Sequence, based on observed residues (ATOM records):

>d4qzfa3 d.218.1.2 (A:303-510) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
vnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqll
hkvtdfwkqqglllycdilqkcflilkldhgrvhgkgwkairvdlvmcpydrrafallgw
tgsrqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna

Timeline for d4qzfa3:

• d4qzfa3 is new in SCOPe 2.05-stable
  
• d4qzfa3 appears in SCOPe 2.06
  
• d4qzfa3 appears in the current release, SCOPe 2.08