SCOPe 2.08: Domain d4zdva1: 4zdv A:2-119

Lineage for d4zdva1 (4zdv A:2-119)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (11 families)

5. Family d.15.1.3: GABARAP-like [54253] (4 proteins)
   intracellular membrane trafficking and fusion proteins
   automatically mapped to Pfam PF02991

6. Protein automated matches [190358] (6 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187279] (33 PDB entries)

8. Domain d4zdva1: 4zdv A:2-119 [273584]
   Other proteins in same PDB: d4zdva2
   automated match to d3wanb_

Details for d4zdva1

PDB Entry: 4zdv, 1.8 Å

PDB Description: crystal structure of lc3 in complex with fam134b lir

PDB Compounds: (A:) Microtubule-associated proteins 1A/1B light chain 3A

SCOPe Domain Sequences for d4zdva1:

Sequence; same for both SEQRES and ATOM records:

>d4zdva1 d.15.1.3 (A:2-119) automated matches {Human (Homo sapiens) [TaxId: 9606]}
psdrpfkqrrsfadrckevqqirdqhpskipviierykgekqlpvldktkflvpdhvnms
elvkiirrrlqlnptqaffllvnqhsmvsvstpiadiyeqekdedgflymvyasqetf

Timeline for d4zdva1:

• d4zdva1 first appeared in SCOPe 2.05, called d4zdva_
  
• d4zdva1 appears in SCOPe 2.07