SCOPe 2.05: Domain d4y4fa2: 4y4f A:186-279

Lineage for d4y4fa2 (4y4f A:186-279)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.0: automated matches [191470] (1 protein)
   not a true family

6. Protein automated matches [190740] (26 species)
   not a true protein

7. Species Mus musculus [TaxId:10090] [272437] (43 PDB entries)

8. Domain d4y4fa2: 4y4f A:186-279 [273226]
   Other proteins in same PDB: d4y4fa1, d4y4fb_, d4y4fc2, d4y4fe1, d4y4ff_, d4y4fg2
   automated match to d3hujc2
   complexed with 49m, nag

Details for d4y4fa2

PDB Entry: 4y4f, 3.19 Å

PDB Description: crystal structure of the mcd1d/gck127/inktcr ternary complex

PDB Compounds: (A:) Antigen-presenting glycoprotein CD1d1

SCOPe Domain Sequences for d4y4fa2:

Sequence, based on SEQRES records:

>d4y4fa2 b.1.1.0 (A:186-279) automated matches {Mus musculus [TaxId: 10090]}
qekpvawlssvpssahghrqlvchvsgfypkpvwvmwmrgdqeqqgthrgdflpnadetw
ylqatldveageeaglacrvkhsslggqdiilyw

Sequence, based on observed residues (ATOM records):

>d4y4fa2 b.1.1.0 (A:186-279) automated matches {Mus musculus [TaxId: 10090]}
qekpvawlssvprqlvchvsgfypkpvwvmwmrgdqeqqgthrgdflpnadetwylqatl
dveageeaglacrvkhsslggqdiilyw

Timeline for d4y4fa2:

• d4y4fa2 is new in SCOPe 2.05-stable
  
• d4y4fa2 appears in SCOPe 2.06
  
• d4y4fa2 appears in the current release, SCOPe 2.08