SCOPe 2.08: Domain d4q5ma1: 4q5m A:1-99

Lineage for d4q5ma1 (4q5m A:1-99)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.50: Acid proteases [50629] (1 superfamily)
   barrel, closed; n=6, S=10, complex topology

4. Superfamily b.50.1: Acid proteases [50630] (4 families)

5. Family b.50.1.1: Retroviral protease (retropepsin) [50631] (9 proteins)
   dimer of identical mono-domain chains, each containing (6,10) barrel

6. Protein Human immunodeficiency virus type 1 protease [50632] (9 species)

7. Species Human immunodeficiency virus type 1 [TaxId:11676] [50633] (590 PDB entries)
   Uniprot P35963 57-155 ! Uniprot P04587 69-167 ! Uniprot P03366 69-167 ! Uniprot P03367 69-167 ! Uniprot P03368 69-167

8. Domain d4q5ma1: 4q5m A:1-99 [271209]
   automated match to d3mimb_
   complexed with roc

Details for d4q5ma1

PDB Entry: 4q5m, 1.8 Å

PDB Description: d30n tethered hiv-1 protease dimer/saquinavir complex

PDB Compounds: (A:) Protease

SCOPe Domain Sequences for d4q5ma1:

Sequence; same for both SEQRES and ATOM records:

>d4q5ma1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]}
pqvtlwqrplvtikiggqlkealldtgadntvleemslpgrwkpkmiggiggfikvrqyd
qilieicghkaigtvlvgptpvniigrnlltqigmtlnf

Timeline for d4q5ma1:

• d4q5ma1 first appeared in SCOPe 2.05
  
• d4q5ma1 appears in SCOPe 2.07