SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1987359Fold a.24: Four-helical up-and-down bundle [47161] (28 superfamilies)
    core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
  4. 1987402Superfamily a.24.3: Cytochromes [47175] (3 families) (S)
    Heme-containing proteins
  5. 1987637Family a.24.3.0: automated matches [271165] (1 protein)
    not a true family
  6. 1987638Protein automated matches [271167] (2 species)
    not a true protein

Species:

  1. 1987639Shewanella frigidimarina [TaxId:56812] [271169] (2 PDB entries)
    1. Domains for 4cx9:
      1. 1987642Domain d4cx9a_: 4cx9 A: [271171]
        automated match to d2xlea_
        complexed with gol, hec, no, so4
      2. 1987643Domain d4cx9b_: 4cx9 B: [271172]
        automated match to d2xlea_
        complexed with gol, hec, no, so4
    2. Domains for 4ulv:
      1. 1987640Domain d4ulva_: 4ulv A: [271268]
        automated match to d2xlea_
        complexed with gol, hec, so4
      2. 1987641Domain d4ulvb_: 4ulv B: [271267]
        automated match to d2xlea_
        complexed with gol, hec, so4
  2. 2287017Hydrogenophilus thermoluteolus [TaxId:297] [330319] (1 PDB entry)

More info for Protein automated matches from a.24.3.0: automated matches

Timeline for Protein automated matches from a.24.3.0: automated matches: