SCOPe 2.08: Domain d4xkde_: 4xkd E:

Lineage for d4xkde_ (4xkd E:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.19: Viral protein domain [49817] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll; form trimers

4. Superfamily b.19.1: Viral protein domain [49818] (4 families)
   forms homotrimers

5. Family b.19.1.0: automated matches [227246] (1 protein)
   not a true family

6. Protein automated matches [227017] (58 species)
   not a true protein

7. Species Influenza A virus h6n1 subtype [TaxId:119212] [269451] (9 PDB entries)

8. Domain d4xkde_: 4xkd E: [271081]
   Other proteins in same PDB: d4xkdb_, d4xkdd_, d4xkdf_
   automated match to d3gbna_
   complexed with nag

Details for d4xkde_

PDB Entry: 4xkd, 2.48 Å

PDB Description: crystal structure of hemagglutinin from taiwan (2013) h6n1 influenza virus

PDB Compounds: (E:) Hemagglutinin HA1 chain

SCOPe Domain Sequences for d4xkde_:

Sequence, based on SEQRES records:

>d4xkde_ b.19.1.0 (E:) automated matches {Influenza A virus h6n1 subtype [TaxId: 119212]}
pgdkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdctie
gwilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfemfp
kstwagvdtsrgvtnacpsytidssfyrnlvwivktdsatypvikgtynntgtqpilyfw
gvhhpldttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvlrpg
etlnvesngnliapwyaykfvstnkkgavfksdlpiencdatcqtitgvlrtnktfqnvs
plwigecpkyvkseslrlatglrnvpq

Sequence, based on observed residues (ATOM records):

>d4xkde_ b.19.1.0 (E:) automated matches {Influenza A virus h6n1 subtype [TaxId: 119212]}
pgdkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdctie
gwilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfemfp
kstwagvdtsrgvtnacpsytidssfyrnlvwivktdsatypvikgtynntgtqpilyfw
gvhhpldttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvlrpg
etlnvesngnliapwyaykfvskkgavfksdlpiencdatcqtitgvlrtnktfqnvspl
wigecpkyvkseslrlatglrnvpq

Timeline for d4xkde_:

• d4xkde_ first appeared in SCOPe 2.05
  
• d4xkde_ appears in SCOPe 2.07