SCOPe 2.08: Domain d4xkfe_: 4xkf E:

Lineage for d4xkfe_ (4xkf E:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.19: Viral protein domain [49817] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll; form trimers

4. Superfamily b.19.1: Viral protein domain [49818] (4 families)
   forms homotrimers

5. Family b.19.1.0: automated matches [227246] (1 protein)
   not a true family

6. Protein automated matches [227017] (58 species)
   not a true protein

7. Species Influenza A virus h6n1 subtype [TaxId:119212] [269451] (9 PDB entries)

8. Domain d4xkfe_: 4xkf E: [270848]
   Other proteins in same PDB: d4xkfb_, d4xkfd_, d4xkff_
   automated match to d3gbna_
   complexed with nag

Details for d4xkfe_

PDB Entry: 4xkf, 2.45 Å

PDB Description: crystal structure of hemagglutinin from taiwan (2013) h6n1 influenza virus in complex with lsta

PDB Compounds: (E:) Hemagglutinin HA1 chain

SCOPe Domain Sequences for d4xkfe_:

Sequence, based on SEQRES records:

>d4xkfe_ b.19.1.0 (E:) automated matches {Influenza A virus h6n1 subtype [TaxId: 119212]}
pgdkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdctie
gwilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfemfp
kstwagvdtsrgvtnacpsytidssfyrnlvwivktdsatypvikgtynntgtqpilyfw
gvhhpldttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvlrpg
etlnvesngnliapwyaykfvstnkkgavfksdlpiencdatcqtitgvlrtnktfqnvs
plwigecpkyvkseslrlatglrnvpq

Sequence, based on observed residues (ATOM records):

>d4xkfe_ b.19.1.0 (E:) automated matches {Influenza A virus h6n1 subtype [TaxId: 119212]}
pgdkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdctie
gwilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfemfp
kstwagvdtsrgvtnacpsytidssfyrnlvwivktdsatypvikgtynntgtqpilyfw
gvhhpldttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvlrpg
etlnvesngnliapwyaykfvskkgavfksdlpiencdatcqtitgvlrtnktfqnvspl
wigecpkyvkseslrlatglrnvpq

Timeline for d4xkfe_:

• d4xkfe_ first appeared in SCOPe 2.05
  
• d4xkfe_ appears in SCOPe 2.07