Lineage for d4rgna1 (4rgn A:2-121)

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2058098Fold b.40: OB-fold [50198] (16 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2058419Superfamily b.40.2: Bacterial enterotoxins [50203] (3 families) (S)
  5. 2059068Family b.40.2.2: Superantigen toxins, N-terminal domain [50219] (16 proteins)
  6. 2059090Protein Staphylococcal enterotoxin B, SEB [50226] (1 species)
  7. 2059091Species Staphylococcus aureus [TaxId:1280] [50227] (18 PDB entries)
  8. 2059120Domain d4rgna1: 4rgn A:2-121 [268731]
    Other proteins in same PDB: d4rgna2, d4rgnc1, d4rgnc2, d4rgne1, d4rgne2, d4rgng1, d4rgng2, d4rgnl1, d4rgnl2, d4rgns2
    automated match to d3seba1

Details for d4rgna1

PDB Entry: 4rgn (more details), 2.7 Å

PDB Description: structure of staphylococcal enterotoxin b bound to two neutralizing antibodies, 14g8 and 6d3
PDB Compounds: (A:) enterotoxin type b

SCOPe Domain Sequences for d4rgna1:

Sequence, based on SEQRES records: (download)

>d4rgna1 b.40.2.2 (A:2-121) Staphylococcal enterotoxin B, SEB {Staphylococcus aureus [TaxId: 1280]}
sqpdpkpdelhksskftglmenmkvlyddnhvsainvksidqflyfdliysikdtklgny
dnvrvefknkdladkykdkyvdvfganyyyqcyfskktndinshqtdkrktcmyggvteh

Sequence, based on observed residues (ATOM records): (download)

>d4rgna1 b.40.2.2 (A:2-121) Staphylococcal enterotoxin B, SEB {Staphylococcus aureus [TaxId: 1280]}
sqpdpkpdelhksskftglmenmkvlyddnhvsainvksidqflyfdliysidnvrvefk
nkdladkykdkyvdvfganyyyqcyfsktcmyggvteh

SCOPe Domain Coordinates for d4rgna1:

Click to download the PDB-style file with coordinates for d4rgna1.
(The format of our PDB-style files is described here.)

Timeline for d4rgna1: