SCOPe 2.08: Domain d4qrnc_: 4qrn C:

Lineage for d4qrnc_ (4qrn C:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families)
   the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
   has transition metal ions bound inside the barrel

5. Family c.1.9.0: automated matches [191327] (1 protein)
   not a true family

6. Protein automated matches [190150] (36 species)
   not a true protein

7. Species Novosphingobium aromaticivorans [TaxId:279238] [267952] (6 PDB entries)

8. Domain d4qrnc_: 4qrn C: [267340]
   Other proteins in same PDB: d4qrna2
   automated match to d3s4ta_
   complexed with 1df, act, cl, gol, mn

Details for d4qrnc_

PDB Entry: 4qrn, 1.07 Å

PDB Description: high-resolution crystal structure of 5-carboxyvanillate decarboxylase (target efi-505250) from novosphingobium aromaticivorans dsm 12444 complexed with manganese and 4-hydroxy-3-methoxy-5-nitrobenzoic acid

PDB Compounds: (C:) 5-carboxyvanillate decarboxylase

SCOPe Domain Sequences for d4qrnc_:

Sequence; same for both SEQRES and ATOM records:

>d4qrnc_ c.1.9.0 (C:) automated matches {Novosphingobium aromaticivorans [TaxId: 279238]}
dlktggeqgylriateeafatreiidvylrmirdgtadkgmvslwgfyaqspseratqil
erlldlgerriadmdatgidkailaltspgvqplhdldeartlatrandtladacqkypd
rfigmgtvapqdpewsareihrgarelgfkgiqinshtqgryldeeffdpifralvevdq
plyihpatspdsmidpmleagldgaifgfgvetgmhllrlitigifdkypslqimvghmg
ealpywlyrldymhqagvrsqryermkplkktiegylksnvlvtnsgvawepaikfcqqv
mgedrvmyamdypyqyvadevramdamdmsaqtkkkffqtnaekwfkl

Timeline for d4qrnc_:

• d4qrnc_ first appeared in SCOPe 2.05
  
• d4qrnc_ appears in SCOPe 2.07