Lineage for d2upja_ (2upj A:)

  1. Root: SCOP 1.55
  2. 6992Class b: All beta proteins [48724] (93 folds)
  3. 15694Fold b.50: Acid proteases [50629] (1 superfamily)
  4. 15695Superfamily b.50.1: Acid proteases [50630] (2 families) (S)
  5. 15696Family b.50.1.1: Retroviral protease (retropepsin) [50631] (7 proteins)
  6. 15712Protein Human immunodeficiency virus type 1 protease [50632] (1 species)
  7. 15713Species Human immunodeficiency virus type 1 [TaxId:11676] [50633] (108 PDB entries)
  8. 15909Domain d2upja_: 2upj A: [26696]

Details for d2upja_

PDB Entry: 2upj (more details), 3 Å

PDB Description: hiv-1 protease complex with u100313 ([3-[[3-[cyclopropyl [4-hydroxy-2oxo-6-[1-(phenylmethyl)propyl]-2h-pyran-3-yl] methyl]phenyl]amino]-3-oxo-propyl]carbamic acid tert-butyl ester)

SCOP Domain Sequences for d2upja_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2upja_ b.50.1.1 (A:) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1}
pqitlwqrplvtikiggqlkealldtgaddtvleemslpgrwkpkmiggiggfikvrqyd
qilieicghkaigtvlvgptpvniigrnlltqigctlnf

SCOP Domain Coordinates for d2upja_:

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Timeline for d2upja_: