Lineage for d4rm5d_ (4rm5 D:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2996664Fold d.157: Metallo-hydrolase/oxidoreductase [56280] (1 superfamily)
    duplication of beta(4)-alpha-beta-alpha motif; 4 layers a/b/b/a; mixed beta-sheets
  4. 2996665Superfamily d.157.1: Metallo-hydrolase/oxidoreductase [56281] (16 families) (S)
  5. 2997604Family d.157.1.0: automated matches [191360] (1 protein)
    not a true family
  6. 2997605Protein automated matches [190418] (31 species)
    not a true protein
  7. 2997710Species Klebsiella pneumoniae [TaxId:573] [189718] (103 PDB entries)
  8. 2997847Domain d4rm5d_: 4rm5 D: [263887]
    automated match to d4eyba_
    complexed with zn

Details for d4rm5d_

PDB Entry: 4rm5 (more details), 2.1 Å

PDB Description: Structural and mechanistic insights into NDM-1 catalyzed hydrolysis of cephalosporins
PDB Compounds: (D:) Beta-lactamase NDM-1

SCOPe Domain Sequences for d4rm5d_:

Sequence, based on SEQRES records: (download)

>d4rm5d_ d.157.1.0 (D:) automated matches {Klebsiella pneumoniae [TaxId: 573]}
gdqrfgdlvfrqlapnvwqhtsyldmpgfgavasnglivrdggrvlvvdtawtddqtaqi
lnwikqeinlpvalavvthahqnkmggmdalhaagiatyanalsnqlapqegmvaaqhsl
tfaangwvepatapnfgplkvfypgpghtsdnitvgidgtdiafggclikdskakslgnl
gdadtehyaasarafgaafpkasmivmshsapdsraaithtarmadklr

Sequence, based on observed residues (ATOM records): (download)

>d4rm5d_ d.157.1.0 (D:) automated matches {Klebsiella pneumoniae [TaxId: 573]}
gdqrfgdlvfrqlapnvwqhtsyldvasnglivrdggrvlvvdtawtddqtaqilnwikq
einlpvalavvthahqnkmggmdalhaagiatyanalsnqlapqegmvaaqhsltfaang
wvepatapnfgplkvfypgpghtsdnitvgidgtdiafggclikdskakslgnlgdadte
hyaasarafgaafpkasmivmshsapdsraaithtarmadklr

SCOPe Domain Coordinates for d4rm5d_:

Click to download the PDB-style file with coordinates for d4rm5d_.
(The format of our PDB-style files is described here.)

Timeline for d4rm5d_: