SCOPe 2.08: Domain d4o4ra_: 4o4r A:

Lineage for d4o4ra_ (4o4r A:)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
   divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members

4. Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families)
   "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain

5. Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)

6. Protein automated matches [190260] (25 species)
   not a true protein

7. Species Murine norovirus 1 [TaxId:223997] [189982] (9 PDB entries)

8. Domain d4o4ra_: 4o4r A: [263246]
   automated match to d1sh0b_
   protein/RNA complex; complexed with 20v, so4

Details for d4o4ra_

PDB Entry: 4o4r, 2.4 Å

PDB Description: Murine Norovirus RdRp in complex with PPNDS

PDB Compounds: (A:) RNA-dependent-RNA-polymerase

SCOPe Domain Sequences for d4o4ra_:

Sequence, based on SEQRES records:

>d4o4ra_ e.8.1.4 (A:) automated matches {Murine norovirus 1 [TaxId: 223997]}
rpsgtyaglpiadygdapplstktmfwrtspeklppgawepaylgskdervdgpslqqvm
rdqlkpyseprgllppqeildavcdaienrlentlepqkpwtfkkacesldkntssgypy
hkqkskdwtgsafigdlgdqathannmyemgksmrpiytaalkdelvkpdkiygkikkrl
lwgsdlgtmiraarafgpfcdalketcifnpirvgmsmnedgpfifarhanfryhmdady
trwdstqqrailkragdimvrlspepdlarvvmddllapslldvgdykivveeglpsgcp
cttqlnslahwiltlcamvevtrvdpdivmqesefsfygddevvstnleldmvkytmalr
rygllptradkeegplerrqtlqgisflrraivgdqfgwygrldrasidrqllwtkgpnh
qnpfetlpghaqrpsqlmallgeaamhgekyyrtvasrvskeaaqsgiemvvprhrsvlr
wvrfg

Sequence, based on observed residues (ATOM records):

>d4o4ra_ e.8.1.4 (A:) automated matches {Murine norovirus 1 [TaxId: 223997]}
rpsgtyaglpiadygdapplstktmfwrtspeklppgawepaylgskdervdgpslqqvm
rdqlkpyseprgllppqeildavcdaienrlentlepqkpwtfkkacesldkntssgypy
hkqkskdwtgsafigdlgdqathannmyemgksmrpiytaalkdelvkpdkiygkikkrl
lwgsdlgtmiraarafgpfcdalketcifnpirvgmsmnedgpfifarhanfryhmdady
trwdstqqrailkragdimvrlspepdlarvvmddllapslldvgdykivveeglpsgcp
cttqlnslahwiltlcamvevtrvdpdivmqesefsfygddevvstnleldmvkytmalr
rygllptradplerrqtlqgisflrraivgdqfgwygrldrasidrqllwtkgpnhqnpf
etlpghaqrpsqlmallgeaamhgekyyrtvasrvskeaaqvvprhrsvlrwvrfg

Timeline for d4o4ra_:

• d4o4ra_ first appeared in SCOPe 2.05
  
• d4o4ra_ appears in SCOPe 2.07