SCOPe 2.08: Domain d4k1rd_: 4k1r D:

Lineage for d4k1rd_ (4k1r D:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (11 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (9 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54239] (312 PDB entries)
   Uniprot P62988
   identical sequence in many other species

8. Domain d4k1rd_: 4k1r D: [262784]
   automated match to d3dbhi_
   complexed with cl, edo, zn

Details for d4k1rd_

PDB Entry: 4k1r, 1.63 Å

PDB Description: Crystal structure of Schizosaccharomyces pombe sst2 catalytic domain and Ubiquitin

PDB Compounds: (D:) Polyubiquitin-C

SCOPe Domain Sequences for d4k1rd_:

Sequence; same for both SEQRES and ATOM records:

>d4k1rd_ d.15.1.1 (D:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

Timeline for d4k1rd_:

• d4k1rd_ first appeared in SCOPe 2.05
  
• d4k1rd_ appears in SCOPe 2.07