SCOPe 2.07: Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

Root: SCOPe 2.07
Class b: All beta proteins [48724] (178 folds)
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
sandwich; 7 strands in 2 sheets; greek-key
some members of the fold have additional strands
Superfamily b.1.1: Immunoglobulin [48726] (5 families)
Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)
Protein automated matches [190374] (17 species)
not a true protein
Species Norway rat (Rattus norvegicus) [TaxId:10116] [262079] (6 PDB entries)

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

Domain(s) for 4uao:
- Domain d4uaob2: 4uao B:108-214 [271998]
  Other proteins in same PDB: d4uaob1
  automated match to d1c5da2
Domain(s) for 4wht:
1. Domain d4whtb2: 4wht B:112-215 [262088]
  Other proteins in same PDB: d4whtb1, d4whtd1, d4whtf1, d4whth1, d4whtj1, d4whtl1, d4whtn1, d4whtp1, d4whtr1, d4whtt1, d4whtv1, d4whty1
  automated match to d1c5da2
2. Domain d4whtd2: 4wht D:112-216 [262084]
  Other proteins in same PDB: d4whtb1, d4whtd1, d4whtf1, d4whth1, d4whtj1, d4whtl1, d4whtn1, d4whtp1, d4whtr1, d4whtt1, d4whtv1, d4whty1
  automated match to d1c5da2
3. Domain d4whtl2: 4wht L:112-215 [262087]
  Other proteins in same PDB: d4whtb1, d4whtd1, d4whtf1, d4whth1, d4whtj1, d4whtl1, d4whtn1, d4whtp1, d4whtr1, d4whtt1, d4whtv1, d4whty1
  automated match to d1c5da2
4. Domain d4whtn2: 4wht N:112-215 [262090]
  Other proteins in same PDB: d4whtb1, d4whtd1, d4whtf1, d4whth1, d4whtj1, d4whtl1, d4whtn1, d4whtp1, d4whtr1, d4whtt1, d4whtv1, d4whty1
  automated match to d1c5da2
5. Domain d4whtp2: 4wht P:112-215 [262094]
  Other proteins in same PDB: d4whtb1, d4whtd1, d4whtf1, d4whth1, d4whtj1, d4whtl1, d4whtn1, d4whtp1, d4whtr1, d4whtt1, d4whtv1, d4whty1
  automated match to d1c5da2
6. Domain d4whtr2: 4wht R:112-215 [262092]
  Other proteins in same PDB: d4whtb1, d4whtd1, d4whtf1, d4whth1, d4whtj1, d4whtl1, d4whtn1, d4whtp1, d4whtr1, d4whtt1, d4whtv1, d4whty1
  automated match to d1c5da2
7. Domain d4whtt2: 4wht T:112-215 [264106]
  Other proteins in same PDB: d4whtb1, d4whtd1, d4whtf1, d4whth1, d4whtj1, d4whtl1, d4whtn1, d4whtp1, d4whtr1, d4whtt1, d4whtv1, d4whty1
  automated match to d1c5da2
8. Domain d4whtv2: 4wht V:112-215 [264108]
  Other proteins in same PDB: d4whtb1, d4whtd1, d4whtf1, d4whth1, d4whtj1, d4whtl1, d4whtn1, d4whtp1, d4whtr1, d4whtt1, d4whtv1, d4whty1
  automated match to d1c5da2
9. Domain d4whty2: 4wht Y:112-215 [264110]
  Other proteins in same PDB: d4whtb1, d4whtd1, d4whtf1, d4whth1, d4whtj1, d4whtl1, d4whtn1, d4whtp1, d4whtr1, d4whtt1, d4whtv1, d4whty1
  automated match to d1c5da2
Domain(s) for 5hbt:
- Domain d5hbtc2: 5hbt C:107-212 [333718]
  Other proteins in same PDB: d5hbta_, d5hbtb1, d5hbtb2, d5hbtc1
  automated match to d1c5da2
  complexed with bma, man, nag
Domain(s) for 5hbv:
- Domain d5hbvc2: 5hbv C:107-211 [333854]
  Other proteins in same PDB: d5hbva_, d5hbvb1, d5hbvb2, d5hbvc1
  automated match to d1c5da2
  complexed with bma, man, nag
Domain(s) for 6qig:
- Domain d6qigl2: 6qig L:108-213 [373786]
  Other proteins in same PDB: d6qigl1
  automated match to d1c12a2
  complexed with bma, ca, cl, fuc, gol, man, nag, peg, zn
Domain(s) for 7kq7:
- Domain d7kq7l2: 7kq7 L:111-217 [402173]
  Other proteins in same PDB: d7kq7l1
  automated match to d1dn0a2

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.1.1.2 automated matches

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.1.1.2 automated matches:

Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.1.1.2 automated matches first appeared in SCOPe 2.04, called Species Rattus norvegicus [TaxId:10116] from b.1.1.2 automated matches
Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.1.1.2 automated matches appears in SCOPe 2.06
Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.1.1.2 automated matches appears in the current release, SCOPe 2.08