SCOPe 2.04: Domain d4rnrb2: 4rnr B:108-210

Lineage for d4rnrb2 (4rnr B:108-210)

1. Root: SCOPe 2.04

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)

6. Protein automated matches [190374] (9 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187221] (385 PDB entries)

8. Domain d4rnrb2: 4rnr B:108-210 [261161]
   Other proteins in same PDB: d4rnrb1
   automated match to d1aqkl2
   complexed with nag

Details for d4rnrb2

PDB Entry: 4rnr, 2.76 Å

PDB Description: crystal structure of broadly neutralizing anti-hiv antibody pgt130

PDB Compounds: (B:) PGT130 Light Chain

SCOPe Domain Sequences for d4rnrb2:

Sequence; same for both SEQRES and ATOM records:

>d4rnrb2 b.1.1.2 (B:108-210) automated matches {Human (Homo sapiens) [TaxId: 9606]}
qpkaapsvtlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskq
snnkyaassylsltpeqwkshrsyscqvthegstvektvapte

Timeline for d4rnrb2:

• d4rnrb2 is new in SCOPe 2.04-stable
  
• d4rnrb2 appears in SCOPe 2.05
  
• d4rnrb2 appears in the current release, SCOPe 2.08