SCOPe 2.06: Domain d4w9jk1: 4w9j K:17-112

Lineage for d4w9jk1 (4w9j K:17-112)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.42: POZ domain [54694] (1 superfamily)
   core: beta(2)-alpha(2)-beta(2)-alpha(2); 2 layers a/b; mixed sheet: 2143

4. Superfamily d.42.1: POZ domain [54695] (3 families)

5. Family d.42.1.1: BTB/POZ domain [54696] (6 proteins)

6. Protein Elongin C [54699] (3 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54700] (41 PDB entries)

8. Domain d4w9jk1: 4w9j K:17-112 [260848]
   Other proteins in same PDB: d4w9ja_, d4w9jc_, d4w9jd_, d4w9jf_, d4w9jg_, d4w9ji_, d4w9jj_, d4w9jk2, d4w9jl_
   automated match to d4b9kb_
   complexed with 3jh

Details for d4w9jk1

PDB Entry: 4w9j, 2.2 Å

PDB Description: pVHL:EloB:EloC in complex with (2S,4R)-1-((S)-2-((S)-2-acetamido-4-methylpentanamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 13)

PDB Compounds: (K:) Transcription elongation factor B polypeptide 1

SCOPe Domain Sequences for d4w9jk1:

Sequence, based on SEQRES records:

>d4w9jk1 d.42.1.1 (K:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]}
myvklissdghefivkrehaltsgtikamlsgpgqfaenetnevnfreipshvlskvcmy
ftykvrytnssteipefpiapeialellmaanfldc

Sequence, based on observed residues (ATOM records):

>d4w9jk1 d.42.1.1 (K:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]}
myvklissdghefivkrehaltsgtikamlstnevnfreipshvlskvcmyftykvrytn
ssteipefpiapeialellmaanfldc

Timeline for d4w9jk1:

• d4w9jk1 first appeared in SCOPe 2.04, called d4w9jk_
  
• d4w9jk1 was called d4w9jk_ in SCOPe 2.05
  
• d4w9jk1 appears in SCOPe 2.07
  
• d4w9jk1 appears in the current release, SCOPe 2.08