SCOPe 2.05: Domain d4updb_: 4upd B:

Lineage for d4updb_ (4upd B:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.69: alpha/beta-Hydrolases [53473] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 8 strands, order 12435678, strand 2 is antiparallel to the rest

4. Superfamily c.69.1: alpha/beta-Hydrolases [53474] (42 families)
   many members have left-handed crossover connection between strand 8 and additional strand 9

5. Family c.69.1.0: automated matches [191404] (1 protein)
   not a true family

6. Protein automated matches [190543] (71 species)
   not a true protein

7. Species Ophiostoma piceae [TaxId:61273] [256199] (3 PDB entries)

8. Domain d4updb_: 4upd B: [260085]
   automated match to d4be4a_
   complexed with 7p9, nag, pge; mutant

Details for d4updb_

PDB Entry: 4upd, 2.4 Å

PDB Description: open conformation of o. piceae sterol esterase mutant i544w

PDB Compounds: (B:) sterol esterase

SCOPe Domain Sequences for d4updb_:

Sequence; same for both SEQRES and ATOM records:

>d4updb_ c.69.1.0 (B:) automated matches {Ophiostoma piceae [TaxId: 61273]}
ttvnvnypegevvgvsvlgiesfrgvpfaqppvgnlrlkppvrytenigtkdttgigpsc
pqmylstgngellfqlvgnliniplfqtatlssedcltlniqrpagttsnsslpvlfwif
gggfelgtnqyydgidlltegislgepfifvainyrvggfgflggkeikadgssnlglld
qrialewvadniasfggdpskvtiwgesagsisvfdqmalyggnnkykgkalfrggimns
gsvvpaapvdgvkaqaiydhvvseagcagtsdtlaclrtvdytkfltavnsvpgivsyss
ialsylprpdgvvlidspeeivknkqyaavpmiigdqedegtlfavlpnnitstakivqy
fqdlyfynatkeqltafvntyptditagspfntgifnelypgfkrlaailgdmtftlarr
aflqlcsevnpdvpswsylasydygfpflgtfhatdilqvfygvlpnyasgsiqkyyinf
vttgdpnkgaavdiqwpqwsakknilqiyatkavivadnfraksyeylynnwgifri

Timeline for d4updb_:

• d4updb_ first appeared in SCOPe 2.04
  
• d4updb_ appears in SCOPe 2.06
  
• d4updb_ appears in the current release, SCOPe 2.08