SCOPe 2.08: Domain d4lypa1: 4lyp A:-1-413

Lineage for d4lypa1 (4lyp A:-1-413)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.0: automated matches [191314] (1 protein)
   not a true family

6. Protein automated matches [190075] (132 species)
   not a true protein

7. Species Rhizomucor miehei [TaxId:4839] [256971] (7 PDB entries)

8. Domain d4lypa1: 4lyp A:-1-413 [258672]
   Other proteins in same PDB: d4lypa2, d4lypb2
   automated match to d1uuqa_
   complexed with gai, trs

Details for d4lypa1

PDB Entry: 4lyp, 1.28 Å

PDB Description: Crystal Structure of Glycoside Hydrolase Family 5 Mannosidase from Rhizomucor miehei

PDB Compounds: (A:) Exo-beta-1,4-mannosidase

SCOPe Domain Sequences for d4lypa1:

Sequence; same for both SEQRES and ATOM records:

>d4lypa1 c.1.8.0 (A:-1-413) automated matches {Rhizomucor miehei [TaxId: 4839]}
efafvkiasdgkgftrygepylirganywqgmnlgaddcsggdrkrmeleikqmaemgin
nlrvmassegpddqpyrmrpsmmpqpgkynegvfvgldylldtmdrynmtavmtlgnfwq
wsggfgqyvawitgnqtipypvgdvtydeftqfaarfyndseiapkanklfkdhiytvqn
rrntvngkiykedpvimswqianepqeapaswfeeistfikkgapkhlvsagleskldey
dfdrahdhknidyttchcwvenwgiydpadpdglphaneymhdflesrskwaaqlnkpiv
meefgmardawrnpedetykylpstptshkdeyyqkafnqivslasnrsfsgsnfwaygg
egrstyppnpygmvwlgdpphephgwysvysndttvqiikdynanllkvqkelsk

Timeline for d4lypa1:

• d4lypa1 first appeared in SCOPe 2.04, called d4lypa_
  
• d4lypa1 appears in SCOPe 2.07