Lineage for d4qlvo_ (4qlv O:)

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1934404Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 1934405Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 1934574Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 1935363Protein Proteasome beta subunit (catalytic) [56252] (5 species)
  7. 1935372Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56254] (70 PDB entries)
    The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8)
  8. 1936056Domain d4qlvo_: 4qlv O: [258437]
    Other proteins in same PDB: d4qlvc_, d4qlvd_, d4qlve_, d4qlvf_, d4qlvg_, d4qlvh_, d4qlvm_, d4qlvp_, d4qlvq_, d4qlvr_, d4qlvs_, d4qlvt_, d4qlvu_, d4qlvv_
    automated match to d1jd2v_
    complexed with 39q, mes, mg

Details for d4qlvo_

PDB Entry: 4qlv (more details), 2.9 Å

PDB Description: yCP in complex with tripeptidic epoxyketone inhibitor 17
PDB Compounds: (O:) Proteasome subunit alpha type-2

SCOPe Domain Sequences for d4qlvo_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4qlvo_ d.153.1.4 (O:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
mtdrysfslttfspsgklgqidyaltavkqgvtslgikatngvviatekksssplamset
lskvslltpdigavysgmgpdyrvlvdksrkvahtsykriygeypptkllvsevakimqe
atqsggvrpfgvslliaghdefngfslyqvdpsgsyfpwkataigkgsvaaktflekrwn
deleledaihialltlkesvegefngdtielaiigdenpdllgytgiptdkgprfrklts
qeindrleal

SCOPe Domain Coordinates for d4qlvo_:

Click to download the PDB-style file with coordinates for d4qlvo_.
(The format of our PDB-style files is described here.)

Timeline for d4qlvo_: