Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds) |
Fold e.8: DNA/RNA polymerases [56671] (1 superfamily) divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members |
Superfamily e.8.1: DNA/RNA polymerases [56672] (7 families) "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain |
Family e.8.1.2: Reverse transcriptase [56686] (3 proteins) |
Protein HIV-1 reverse transcriptase [56689] (3 species) |
Species Human immunodeficiency virus type 1 [TaxId:11676] [56690] (153 PDB entries) Uniprot P04585 159-692 # chain A coverage; chain B is shorter: 162-582 ! Uniprot P03366 186-725 # chain A coverage; chain B coverage: 156-584 ! Uniprot P04585 158-698 # chain A coverage; chain B is shorter: 159-595 |
Domain d4pqud_: 4pqu D: [257527] Other proteins in same PDB: d4pqua1, d4pqua2, d4pquc1, d4pquc2 automated match to d3is9b_ protein/DNA complex; protein/RNA complex; complexed with dtp, edo, gol, mg, so4 |
PDB Entry: 4pqu (more details), 2.51 Å
SCOPe Domain Sequences for d4pqud_:
Sequence, based on SEQRES records: (download)
>d4pqud_ e.8.1.2 (D:) HIV-1 reverse transcriptase {Human immunodeficiency virus type 1 [TaxId: 11676]} spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfa ikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvplde dfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyq ymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvq pivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaele laenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgaht ndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntppl vklwyq
>d4pqud_ e.8.1.2 (D:) HIV-1 reverse transcriptase {Human immunodeficiency virus type 1 [TaxId: 11676]} spietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfa ikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvplde dfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyq ymddlyvgsdleigqhrtkieelrqhllrwglttpgyelhpdkwtvqpivlpekdswtvn diqklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenreilkepvh gvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqki ttesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq
Timeline for d4pqud_: